Query= MSMg01no315_g17.b1 MSMg01no315_g17.b1 CHROMAT_FILE:
MSMg01no315_g17.b1 PHD_FILE: MSMg01no315_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:52 2005
(695 letters)
>mm_chr16_85101870_85102964
Length = 1095
Score = 1243 bits (643), Expect = 0.0
Identities = 679/691 (98%)
Strand = Plus / Plus
Query: 5 gaattcaggttcttccgaagagcagcaagaactcttaactgcagagctgttccaccagct 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggttcttcagaagagcagcaagaactcttaactgcagagctgttccaccagct 264
Query: 65 tccagtatgctctatggaatccactgctaaacaaaactatacaagttcctagagtcttca 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 tccagtatgctctatggaatccacagctaaacaaaactatacaagttcctagagtcttca 324
Query: 125 gtatttatctttatttacaaggttttgattggagcccttgtagctaaagtgttggaatgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtatttatctttatttacaaggttttgattggagcccttgtagctaaagtgttggaatgc 384
Query: 185 aaactcacctccttgtacctggaaggggaacggtgactctctaaaaaagatttcttttag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaactcacctccttgtacctggaaggggaacggtgactctctaaaaaagatttcttttag 444
Query: 245 actttattcaaagtcatcactatccatataaagatctccattcttaaaaccttcttatta 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 actttattcaaagtcatcactatccatataaagatctccattcttacaaccttcttatta 504
Query: 305 atcaataacaatggaaacattcaagtaggatttatcacatcaaacagggctagctatggt 364
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 505 atcaataacaatggaaacattcaagtgggatttatcacatcaaacagggctagctatggc 564
Query: 365 aggcttgcccacatgaaatgccaggaagaaggtgtgacaagattgaaaatggacttaaga 424
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggcttgttcacatgaaatgccaggaagaaggtgtgacaagattgaaaatggacttaaga 624
Query: 425 tggctttctcaaaagacaaaaaggactccattttttaagataaaaatgaaagtagagttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggctttctcaaaagacaaaaaggactccattttttaagataaaaatgaaagtagagttt 684
Query: 485 tcaggcctttgtgaacacatggtttccttcggtttgatctgaataaatataaaatcaaac 544
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 685 tcaggcctttgtgaacacatggtttccttcggttcgatctgaataaatataaaatcaaac 744
Query: 545 aatccagcaaacatacttcctgatcattttcaactgtaggaacaaggggtgccctgggga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 745 aatccagcaaacatacttcctgatcattttcaactgtaggaacaaggggtgccctaggga 804
Query: 605 agggctttctgaggaattagctagagagtggagacctcacattatagtcttcctgtgaaa 664
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 805 agggctttctgaggaattagctagagtgtggagacctcacattatagtcttcctgtgaaa 864
Query: 665 tcctgtgaagaaatatacacggcctgccatt 695
|||||||| |||||||||| |||||||||||
Sbjct: 865 tcctgtgaggaaatatacaaggcctgccatt 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_g17.g1 MSMg01no315_g17.g1 CHROMAT_FILE:
MSMg01no315_g17.g1 PHD_FILE: MSMg01no315_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:52 2005
(657 letters)
>mm_chr16_85127748_85128806
Length = 1059
Score = 1122 bits (580), Expect = 0.0
Identities = 639/664 (96%), Gaps = 12/664 (1%)
Strand = Plus / Minus
Query: 1 tgatcttgataatgaaaaggagagaaagttcctggagagaaggagcgccctgtttgaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 tgatcttgataatgaaaaggagagaaagttcctggagagaaggagcgccctgtttgaaag 800
Query: 61 gcagaaagagagcttgttccagactctgcctcttcccttcattgtaaatggcaggggttg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 799 gcagaaagagagcttgttccagacgctgcctcttcccttcattgtaaatggtaggggttg 740
Query: 121 gaggggtagacttccccattcaccctctgcagatgggtccaagtcaagtccatatgctta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 739 gaggggtagacttccccattcaccctctgcagatgggtccaagtcaagtccatatgttta 680
Query: 181 cctttattttagctgtgctgatttaaggccaacgtctagctgcagtaccatgaggagagt 240
|||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 679 cctttattttagctctgctgatttaaggccaacatctagctgcagtaccatgaggaaagt 620
Query: 241 ccatagcatgtctttgttctctgtgttgtggctcaagg--aaaaaaaaacaaactgtttt 298
|||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 619 ccatggcatgtctttgctctctgtgttgtggctcaaggaaaaaaaaaaacaaactttttt 560
Query: 299 gttttccctgatagcaaaggtttgtttccaaaaagtttagc--tg---cccccttaagag 353
||||||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct: 559 gttttccctgatagcaaaggtttgtttccaaaaaggttagccgtgttt-----ttaagag 505
Query: 354 taatatttccgtggctctagctcagtgtttttttaagtagcctctttgcttttgaagcca 413
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 504 taatatttccgtggctctagctcagcgtttttttaagtagcctctttgcttttgaagcca 445
Query: 414 tggctgaacacctactgtttcagctggctgttttgtttgttggcaccgaacactgttttc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggctgaacacctactgtttcagctggctgttttgtttgttggcaccgaacactgttttc 385
Query: 474 ccatgggaaaaatatctccagtttcaggatggcggcagcaatccatacaggttattttca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccatgggaaaaatatctccagtttcaggatggcggcagcaatccatacaggttattttca 325
Query: 534 tacacagcctccacaaaaccacacgaaccacgcagagccacctgtgtacagtatgggttc 593
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacgcagcctccacaaaaccacacgaaccacgcagagccacctgtgtacagtatgggttc 265
Query: 594 tagcccgcactgttgacttacatttctgaaaaaaataacctggtggtgctaattccactg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 264 tagcccgcactgttgacttacatttctgaaaaaaataacctggtggtgctaatcccactg 205
Query: 654 gtgg 657
||||
Sbjct: 204 gtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1059
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1049
Effective search space: 678703
Effective search space used: 678703
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
