Query= MSMg01no316_d15.b1 MSMg01no316_d15.b1 CHROMAT_FILE:
MSMg01no316_d15.b1 PHD_FILE: MSMg01no316_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:55 2005
(651 letters)
>mm_chr16_42616687_42617733
Length = 1047
Score = 1050 bits (543), Expect = 0.0
Identities = 558/565 (98%), Gaps = 4/565 (0%)
Strand = Plus / Minus
Query: 3 gagcaagcacttttctccactgggatgtctctccatcttacaatattgcttctttttttt 62
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 gagcaagcacttttctccactgggatgtctctccatcttacaatattgc----ttttttt 506
Query: 63 ttaaataacatcctactttacaacagaaatactttagcaagtgcatgtattactataaat 122
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaaataacattctactttacaacagaaatactttagcaagtgcatgtattactataaat 446
Query: 123 ctgaagaagttgatgaattcagtaatattttctagtcattactgatctctctctggtcag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgaagaagttgatgaattcagtaatattttctagtcattactgatctctctctggtcag 386
Query: 183 agctcatgtctgtcatgttcagagttgtttacccttccacctgttaagagatcttccctg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agctcatgtctgtcatgttcagagttgtttacccttccacctgttaagagatcttccctg 326
Query: 243 ctctttctatataggtttccattgtctactataacttagtcatcttaattgtcctgtgtt 302
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 ctctttctatataggtttccattgtctgctataacttagtcatcttaattgtcctgtgtt 266
Query: 303 attttgtacatactaattacttgaattaggagttgtaacctatcagtattacatacttac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attttgtacatactaattacttgaattaggagttgtaacctatcagtattacatacttac 206
Query: 363 ctcttgcctcccctcactatgaaatcaactccaagtaagcaagacttcgttcctagactt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcttgcctcccctcactatgaaatcaactccaagtaagcaagacttcgttcctagactt 146
Query: 423 ctattcctgcctacccatagcatttctggtgtatggtaaatgctcaatacctatttgtta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ctattcctgcctacccatagcatttctggtgtatggtaaatgctcaatacctatttgtta 86
Query: 483 gatggtccaatgaattgtaaataacattaagaaggactggggctacatattgatccattt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gatggtccaatgaattgtaaataacattaagaaggactggggctacatattgatccattt 26
Query: 543 tgattagaacacaaattgagtctct 567
|||||||||||||||||||||||||
Sbjct: 25 tgattagaacacaaattgagtctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1047
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1037
Effective search space: 664717
Effective search space used: 664717
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_d15.g1 MSMg01no316_d15.g1 CHROMAT_FILE:
MSMg01no316_d15.g1 PHD_FILE: MSMg01no316_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:55 2005
(670 letters)
>mm_chr16_42466851_42467920
Length = 1070
Score = 1259 bits (651), Expect = 0.0
Identities = 666/671 (99%), Gaps = 2/671 (0%)
Strand = Plus / Plus
Query: 1 actgatgatgtttttcagctcagtcctgggtaatctcggatgcagatctttgtattgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgatgatgtttttcagctcagtcctgggtaatctcggatgcagatctttgtattgaac 260
Query: 61 aaataccaaatgcctcgctctctcattgtacctaattgtttagtgatcagctgaatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaataccaaatgcctcgctctctcattgtacctaattgtttagtgatcagctgaatggag 320
Query: 121 tattatgggaaataacaagaaatcctactggctaatataagagtcagacaggggaaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattatgggaaataacaagaaatcctactggctaatataagagtcagacaggggaaactt 380
Query: 181 accttcccatctgctatctctggcactcattaatcacactggcatttaggaaatagcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttcccatctgctatctctggcactcattaatcacactggcatttaggaaatagcagc 440
Query: 241 caggtgccctggaaagtagaaaatggaagctgtaagaaagaaaaggaaagaaagatttga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 caggtgccctggaaagtagaaaatggaagctgtaagaaagaaaaggaaagaaaggtttga 500
Query: 301 gttcttttt-tgaaacccctcattaatgcatgttatagaaaaggattagggaaaatgtac 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttctttttatgaaacccctcattaatgcatgttatagaaaaggattagggaaaatgtac 560
Query: 360 aagcttggtgattattgtatttatgtgcagagttcctgtcttcattcccagaccagagga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcttggtgattattgtatttatgtgcagagttcctgtcttcattcccagaccagagga 620
Query: 420 agaaagtgcatggaaatgtaggaaaacgtttttatacctattcttaattcgtaaatttgg 479
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 agaaagtgcatggaaatgtaggaaaacgtttttatacctattcttaattcataaatttgg 680
Query: 480 aagtctactcactatgatattgagtaaacctgtttttaacaactaaataatggctattca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagtctactcactatgatattgagtaaacctgtttttaacaactaaataatggctattca 740
Query: 540 catctggctttcagtttcttttacttgataaaaatcccaaatagcagactatctgacttg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catctggctttcagtttcttttacttgataaaaatcccaaatagcagactatctgacttg 800
Query: 600 aagccgtatgcctgaaaatcttgttccagggtaatgcaggggggaaattcttctattgta 659
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 801 aagctgtatgcctgaaaatcttgttccagggtaatgc-ggggggaaattcttctattgta 859
Query: 660 attactgaaac 670
|||||||||||
Sbjct: 860 attactgaaac 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
