Query= MSMg01no317_b15.b1 MSMg01no317_b15.b1 CHROMAT_FILE:
MSMg01no317_b15.b1 PHD_FILE: MSMg01no317_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:02 2005
(696 letters)
>mm_chr16_52875696_52876791
Length = 1096
Score = 1294 bits (669), Expect = 0.0
Identities = 687/693 (99%), Gaps = 2/693 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatattacgcttttttttaaaggctatttttggtgtgagcataacctttaatgg 64
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatattacgattttttt-aaaggctatttttggtgtgagcataacctttaatgg 263
Query: 65 ctgagcggtctctctagtcctgtatttttctcatagacagaatcctaccaaggctgtcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgagcggtctctctagtcctgtatttttctcatagacagaatcctaccaaggctgtcct 323
Query: 125 ctgagaggttctacaagcagctgactgagatagatgcagatgctcacagtcaagcattgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgagaggttctacaagcagctgactgagatagatgcagatgctcacagtcaagcattgg 383
Query: 185 atagaggtcagggaaccttgtggaagcgatgctggggagggacaggtattgaagaaactg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atagaggtcagggaaccttgtggaagcgatgctggggagggacaggtattgaagaaactg 443
Query: 245 aggaggatggcaacctcataggaagacctacacagccactaaccaaagtgcattcatggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aggaggatggcaacctcataggaagacctacacagccactaaccaaagtgcattcatggt 503
Query: 305 ctggtctgatgcccctagctcatatgtagcagaggactgcattttgtggtatcatggaga 364
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 504 ctggtctgatgcccctagctcatatgtagcagaggactgcattttgtggcatcatggaga 563
Query: 365 gaggatgagactaattctgtagagacatgataccccaaggttggaggatacctgaaggg- 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaggatgagactaattctgtagagacatgataccccaaggttggaggatacctgaagggg 623
Query: 424 cactctctcagaagcaaaggctaggaagtatctgggaacaattctgtgaggaggacatgg 483
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cactctcttagaagcaaaggctaggaagtatctgggaacaattctgtgaggaggacatgg 683
Query: 484 gagtggggcaacatttggaatataaataaataaaataatttatcaatgaagaaagactat 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 684 gagtggggcaacatttggaatataaataaataaaataatttatcaatgaagaaagattat 743
Query: 544 catggtttattagtaaaagtttgaaatagttatttgctactttatttagataacagaaca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 catggtttattagtaaaagtttgaaatagttatttgctactttatttagataacagaaca 803
Query: 604 tgtgaagattaaccttaaaatttgatttgttgtttcccataccaatccatttcttcctac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgtgaagattaaccttaaaatttgatttgttgtttcccataccaatccatttcttcctac 863
Query: 664 actcattatttcagctcatacttattaagtgtt 696
|||||||||||||||||||||||||||||||||
Sbjct: 864 actcattatttcagctcatacttattaagtgtt 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_b15.g1 MSMg01no317_b15.g1 CHROMAT_FILE:
MSMg01no317_b15.g1 PHD_FILE: MSMg01no317_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:03 2005
(663 letters)
>mm_chr16_53037409_53038472
Length = 1064
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 1 ctaagaaccagtgttataatcctctgttaaatacaaatatatcagtggt-aaaaatattg 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 493 ctaagaaccagtgttataatcctctgttaaatacaaatatatcagtggtaaaaaatattg 434
Query: 60 tttataaaactttaaggaggataagagagaaacaatcaaaattgattgatatagtccata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttataaaactttaaggaggataagagagaaacaatcaaaattgattgatatagtccata 374
Query: 120 aggagttacacagaaaaactttgtagattcactaacatgggttgaaatccagtttactta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aggagttacacagaaaaactttgtagattcactaacatgggttgaaatccagtttactta 314
Query: 180 aataatgtcagtatttatttttacctcctcattttatgaataatttgcctcctaatttta 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 313 aataatgtcagtatttatttttacctcctcattttatgaataatttacctcctaatttta 254
Query: 240 tgttctaagtattatctatgttgactgagctgttatctcactgaagtatgtgattttt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgttctaagtattatctatgttgactgagctgttatctcactgaagtatgtgattttt 196
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1064
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1054
Effective search space: 688262
Effective search space used: 688262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
