Query= MSMg01no317_m03.b1 MSMg01no317_m03.b1 CHROMAT_FILE:
MSMg01no317_m03.b1 PHD_FILE: MSMg01no317_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:48 2005
(278 letters)
>mm_chr16_72791340_72792017
Length = 678
Score = 466 bits (241), Expect = e-136
Identities = 266/275 (96%), Gaps = 2/275 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatttggcataacacaaaaaaaagaatgaagtgctgacgggcagactcagagg 63
|||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggaattccatttggcagaaaaaaaaaaaaagaatgaagtgctgacgggcagactcagagg 314
Query: 64 aactccacaagtatgtttaccgatggaggccacaccagagctacacactcaataactcta 123
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aactccacaagtatgtttagtgatggaggccacaccagagctacacactcaataactcta 254
Query: 124 tttatatggagtgaaagaatagaaaacactgatttattacagcatacacatgtgcgtgcg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tttatatggagtgaaagaatagaaaacactgatttattacagcatacacatgtgcgtgcg 194
Query: 184 tgtgcgtttctgtgtgcatgtgcgcgtgtatgaatgtgtgtttttgcaatggtttgtttc 243
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 193 tgtgcgtttctgtgtgcatgtgcgcatgtatgaatgtga--ttttgcaatggtttgtttc 136
Query: 244 tattaataggacggacttggaagagcaattaagaa 278
|||||||||||||||||||||||||||||||||||
Sbjct: 135 tattaataggacggacttggaagagcaattaagaa 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_m03.g1 MSMg01no317_m03.g1 CHROMAT_FILE:
MSMg01no317_m03.g1 PHD_FILE: MSMg01no317_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:48 2005
(234 letters)
>mm_chr16_72607381_72608014
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Plus
Query: 1 ttcttccctgttccttccgtttgactatattttgaaaaatatatttttgccaagccacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcttccctgttccttccgtttgactatattttgaaaaatatatttttgccaagccacct 260
Query: 61 ataaattctctcaactgaatcttagatcaagactcttacattgaagccacatgaaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaattctctcaactgaatcttagatcaagactcttacattgaagccacatgaaagtga 320
Query: 121 aatttaattctatccaaactaaattaagtcaatatgactcatgttccaatcatgcatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatttaattctatccaaactaaattaagtcaatatgactcatgttccaatcatgcatgtt 380
Query: 181 agcatttttagacttttgtatagtaaaataccttgtgatgataatttgggtgtg 234
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 agcatttttagacttttgtagagtaaaataccttgtgatgataatttgggtgtg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
