Query= MSMg01no320_n03.b1 MSMg01no320_n03.b1 CHROMAT_FILE:
MSMg01no320_n03.b1 PHD_FILE: MSMg01no320_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:25 2005
(606 letters)
>mm_chr16_66635751_66636758
Length = 1008
Score = 1085 bits (561), Expect = 0.0
Identities = 596/609 (97%), Gaps = 4/609 (0%)
Strand = Plus / Plus
Query: 1 tctgttgtcatttaagtaatccatattcctagtcagtacatgtcattgttccatagattg 60
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 201 tctgttgtcatttaagtaatccatattcctagtcagtacatgtcactgttttatagattg 260
Query: 61 tggtactgatgtacatgtctctcttccaagatttgctgaataaattgccatcatactcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtactgatgtacatgtctctcttccaagatttgctgaataaattgccatcatactcaa 320
Query: 121 agctaatttaggaaatacattaagaaaatcaagacttgtaaatatttgtcatgccaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctaatttaggaaatacattaagaaaatcaagacttgtaaatatttgtcatgccaactt 380
Query: 181 catgtagattttcctttataagggagcaaagaaaaaaaaaagactcgaattcctcaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtagattttcctttataagggagcaaagaaaaaaaaaagactcgaattcctcaaatg 440
Query: 241 gtctatttagtttttgtgtggttaaaaataagtagaaaaaaa---atacaaaagccatta 297
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 441 gtctatttagtttttgtgtggtt-aaaataagtagaaaaaaaagcatacaaaagccatta 499
Query: 298 tgtctgaaccttcccatgttctttgtttaactgaacattgtgttgactgaaattctttgt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtctgaaccttcccatgttctttgtttaactgaacattgtgttgactgaaattctttgt 559
Query: 358 tgattgtgtttgtttttagaattaccaaagaatatccttctgttagagatgcattctgta 417
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 560 tgattgtgtttgtttttagaattacaaaagaatatccttctgttagagatgcattctgta 619
Query: 418 gttccaaactgtggaaacggaaccataccaaatacaacaaagtctaacaaaatgccaggt 477
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 gttccaaactgtggaaacggaaccataccaaatacaacaatgtctaacaaaatgccaggt 679
Query: 478 gcagtctctccctgtgtacatatgtgtgattagtagaaagaaaagtactgagaacttact 537
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 680 gcagtctctccctgtgtacatatgtgtgattagtagaaagaaaattactgagaatttact 739
Query: 538 tatgtataactagtagagagaaaatataactatctaattctaattatctgtctatatttt 597
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 740 tatgtataaatagtagagagaaaatataactatctaattctaattatctgtttatatttt 799
Query: 598 ccttgtttc 606
|||||||||
Sbjct: 800 ccttgtttc 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1008
Length adjustment: 10
Effective length of query: 596
Effective length of database: 998
Effective search space: 594808
Effective search space used: 594808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_n03.g1 MSMg01no320_n03.g1 CHROMAT_FILE:
MSMg01no320_n03.g1 PHD_FILE: MSMg01no320_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:25 2005
(228 letters)
>mm_chr16_66797058_66797685
Length = 628
Score = 433 bits (224), Expect = e-126
Identities = 227/228 (99%)
Strand = Plus / Minus
Query: 1 agatttgggcttctcctcttttagtcactggttatttacctcttgaatcctgccttctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agatttgggcttctcctcttttagtcactggttatttacctcttgaatcctgccttctaa 369
Query: 61 gtagagtggcaaaaacccattatgggatagacagatgtgcatgtgtgttcaagtaaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gtagagtggcaaaaacccattatgggatagacagatgtgcatgtgtgttcaagtaaattt 309
Query: 121 taaagtctagttcctttgaattcttcaagtgtttcaatgaggattaaggtatatgatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 taaagtctagttcctttgaattcttcaagtgtttcaatgaggattaaggtatatgatgaa 249
Query: 181 agttcttgaataccagataattagttaacattgtctatacatgctgat 228
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 248 agttcttgaagaccagataattagttaacattgtctatacatgctgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
