Query= MSMg01no321_c01.b1 MSMg01no321_c01.b1 CHROMAT_FILE:
MSMg01no321_c01.b1 PHD_FILE: MSMg01no321_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:48 2005
(657 letters)
>mm_chr16_15074633_15075689
Length = 1057
Score = 1193 bits (617), Expect = 0.0
Identities = 647/661 (97%), Gaps = 8/661 (1%)
Strand = Plus / Minus
Query: 1 tgttgttgaaaatgagcccacctggatgtcttctttctaacagaata----ccccatttc 56
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 857 tgttgttgaaaatgagcccacctggatgtcttctttctaacagaatagtag----atttc 802
Query: 57 atatataacaaagtagagggtagaggtgggttatgaaggaagaggaaaggatatgaaagg 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atatataacaaagtagagggtagaggtgggttatgaaggaagaggaaaggatatgaaagg 742
Query: 117 agtcaggcaggataagagatggtaatgggggagaaggactaaacattttctcagctgtgg 176
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 agtcaggcaggataagagatggtaatgggggcgaaggactaaacattttctcagctgtgg 682
Query: 177 aatcaatatttgaatatataagacatgaaggcaaaggggaactgttggggaggattactg 236
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatcaatatttaaatatataagacatgaaggcaaaggggaactgttggggaggattactg 622
Query: 237 aggtccagttcgctcttgggtgcccagtggacagccctggaggatgagaattttgagttt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggtccagttcgctcttgggtgcccagtggacagccctggaggatgagaattttgagttt 562
Query: 297 gttataagtaggaaagaacactgggctggaagaacactatcatgacatagcaagaaaaaa 356
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 561 gttataagtaggaaagaacactgggctgggagaacactatcatgacatagtaagaaaaaa 502
Query: 357 acagataggggagtgcaaggcacagtcacctcatagggaatgatagaagaatcaggttat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagataggggagtgcaaggcacagtcacctcatagggaatgatagaagaatcaggttat 442
Query: 417 atggcaacagtgcccttcactcatttcctggatatggccatctaccagaggtggaggcta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atggcaacagtgcccttcactcatttcctggatatggccatctaccagaggtggaggcta 382
Query: 477 cagagagcagtggcttattttactctcacttggagactgaactttggctctgctgtttgg 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 cagagagcagtggcttattttactctcacttggagactgaactttggctctgctatttgg 322
Query: 537 gagaatacagaggtgttttatatgccagtttgcaaaatgaaggctttgagctgttgggaa 596
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 gagaatacagaggtgttttatatgccagtttgtaaaatgaaggctttgagctgttgggaa 262
Query: 597 gtaaacagaatgcagaggacaatattctgttttatttttcattctaattaatattactta 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaaacagaatgcagaggacaatattctgttttatttttcattctaattaatattactta 202
Query: 657 a 657
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_c01.g1 MSMg01no321_c01.g1 CHROMAT_FILE:
MSMg01no321_c01.g1 PHD_FILE: MSMg01no321_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:48 2005
(652 letters)
>mm_chr16_14893924_14894976
Length = 1053
Score = 1247 bits (645), Expect = 0.0
Identities = 651/653 (99%), Gaps = 1/653 (0%)
Strand = Plus / Plus
Query: 1 cccacacagacagcaagtcggctgctggggatgaactcagcagctctacagaaagcccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccacacagacagcaagtcggctgctggggatgaactcagcagctctacagaaagcccct 260
Query: 61 ctgttctcaagcaccaaggtgcctgagtggcgtgttctggaggccacagaaggaggaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgttctcaagcaccaaggtgcctgagtggcgtgttctggaggccacagaaggaggaact 320
Query: 121 gtttgaaaaggggtgtttttt-ccctagaatacacagcgatcctatttccttaggggtgc 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgaaaaggggtgtttttttccctagaatacacagcgatcctatttccttaggggtgc 380
Query: 180 tgtaaaaactagccatgactagattgccaaatgtagctaaaagtcagcaaggatatttat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtaaaaactagccatgactagattgccaaatgtagctaaaagtcagcaaggatatttat 440
Query: 240 ctcctcaggctaaagttgttgggatggatctctcagaccaactttgaatactcaataaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctcaggctaaagttgttgggatggatctctcagaccaactttgaatactcaataaat 500
Query: 300 caaaatgaaagattaaaataagaaagcatttgctaagcatgtttggaaagagcactttta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaatgaaagattaaaataagaaagcatttgctaagcatgtttggaaagagcactttta 560
Query: 360 tattgctattttttcttgctctgtgattttactggctttttaatccaataagaaatgtgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattgctattttttcttgctctgtgattttactggctttttaatccaataagaaatgtgc 620
Query: 420 atgcatttgaggggggaaacaaaaacagaaaaggaaaaaggtaaccgattcttggagctt 479
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcatttgaggtgggaaacaaaaacagaaaaggaaaaaggtaaccgattcttggagctt 680
Query: 480 tgactctcaagagattttcaggtgaaaagaattcaatagctaaatctaaactcagttgtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgactctcaagagattttcaggtgaaaagaattcaatagctaaatctaaactcagttgtt 740
Query: 540 tttattaagtgtaaaacacaaacaaacaaaaacgggaaacaatccctgaagggccatgac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttattaagtgtaaaacacaaacaaacaaaaacgggaaacaatccctgaagggccatgac 800
Query: 600 tgatgatcaaaaaaaaaaaaaaaaaatctactgaattgtattctttgtttctc 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgatgatcaaaaaaaaaaaaaaaaaatctactgaattgtattctttgtttctc 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1053
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1043
Effective search space: 669606
Effective search space used: 669606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
