Query= MSMg01no321_j24.b1 MSMg01no321_j24.b1 CHROMAT_FILE:
MSMg01no321_j24.b1 PHD_FILE: MSMg01no321_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:24 2005
(333 letters)
>mm_chr16_90456573_90457305
Length = 733
Score = 582 bits (301), Expect = e-170
Identities = 316/321 (98%)
Strand = Plus / Minus
Query: 13 gaattctctttgggtttccctttctcagtgctgtcaacaaagccatgggtaccacacaga 72
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gaattctctttgggtttccatttctcagtgctgtcaacaaagccatgggtaccacacaga 474
Query: 73 aacctaatcccaggcttcacacacaggactctaagggagtggaaaattcattgtataaag 132
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aacctaatcccaggcttcaggcacaggactctaagggagtggaaaattcattgtataaag 414
Query: 133 gaggctctgaggtttcatgttttcaccaagaccttaagagttggcagtgatcagatgcat 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gaggctctgaggtttcatgttttcaccaagaccttaagagttggcagtgatcagatgcat 354
Query: 193 ggtacactctgcccaggactttccccgcctcttcctacccggccagctttgctcagctct 252
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggtacactctgcccgggactttccccgcctcttcctacccggccagctttgctcagctct 294
Query: 253 tgggagcaggttaagggacccctccactgctttctcgttttcatgcacacacctcctgag 312
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgggagcaggttaagggccccctccactgctttctcgttttcatgcacacacctcctgag 234
Query: 313 gtgtttcatgcacacagttct 333
|||||||||||||||||||||
Sbjct: 233 gtgtttcatgcacacagttct 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_j24.g1 MSMg01no321_j24.g1 CHROMAT_FILE:
MSMg01no321_j24.g1 PHD_FILE: MSMg01no321_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:25 2005
(293 letters)
>mm_chr16_90285128_90285819
Length = 692
Score = 507 bits (262), Expect = e-148
Identities = 283/290 (97%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 aaaggaggggccctctggaccttgcgcgctgtgccatcacctctccttgcaggacaaccg 60
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 201 aaaggaggggccctctggaccttgcgcgctgtgctatcacctctccttggaggacaaccg 260
Query: 61 gctggtacttagggaaagcaactggccctaccgagaccagatcctagcagagttaggatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctggtacttagggaaagcaactggccctaccgagaccagatcctagcagagttaggatt 320
Query: 121 ttgttcttaagggggcagcatgcaggttgacatcctgcaaagtatgcatgcggaagaaag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttcttaagggggcatcatgcaggttgacatcctgcaaagtatgcatgcggaagaaag 380
Query: 181 tggggccaggaacagcatggcttcgggccctggagatgatgaggctgaaggtatcaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggggccaggaacagcatggcttcgggccctggagatgatgaggctgaaggtatcaggca 440
Query: 241 cgggagaaaagaccagaatggtgttcgggagggaagatgcacactgcttc 290
| |||| |||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 441 ctggaggaaagac-agaatggtgttccggagggaagatgcacactgcttc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
