Query= MSMg01no322_b23.b1 MSMg01no322_b23.b1 CHROMAT_FILE:
MSMg01no322_b23.b1 PHD_FILE: MSMg01no322_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:01 2005
(636 letters)
>mm_chr16_7294432_7295468
Length = 1037
Score = 1152 bits (596), Expect = 0.0
Identities = 626/636 (98%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 2 ggaattctcttgttttacaaaaaaaggg-gcaggtctcgggctggtgagcacaggtgctg 60
|||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||
Sbjct: 202 ggaattctcttgttaaaaaaaaaaaaggtgcaggtctcgggctggtgagcacaggtgctg 261
Query: 61 tgagtttgggccacattggccttccatacctactgtctcattgctgaccgactacagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgagtttgggccacattggccttccatacctactgtctcattgctgaccgactacagtga 321
Query: 121 actaactcagagctgattttcacagcaaagcaaatatagtttttaaattcagtcatccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actaactcagagctgattttcacagcaaagcaaatatagtttttaaattcagtcatccca 381
Query: 181 tctctctagagtcccctccctccgccaggactaacaccaatcatgacttgcatcgtttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctctctagagtcccctccctccgccaggactaacaccaatcatgacttgcatcgtttaa 441
Query: 241 cttcttgtaatgctagcaaattaaggaaagtgtatttgttttgtcagttatttttttaat 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 442 cttcttgtaatgctagcaaattaaggaaagtgtaaaagttttgtcagttatttttttaat 501
Query: 301 ccataaatccttaataagttgtcactcatggaagtatagttacagaatctggttctggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccataaatccttaataagttgtcactcatggaagtatagttacagaatctggttctggct 561
Query: 361 ttcagacttcccggatattaaagtattctcgaggaagctgatggttgagcttcatgggaa 420
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttcagacttcttggatattaaagtattctcgaggaagctgatggttgagcttcatgggaa 621
Query: 421 tgtggctgcatgagttggttatcctctctgatgcaggtatccctgagggccatgggacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgtggctgcatgagttggttatcctctctgatgcaggtatccctgagggccatgggacca 681
Query: 481 gttgagcccatggatatgtactggagacttctgtaggaaaaagaatttctgtggttacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gttgagcccatggatatgtactggagacttctgtaggaaaaagaatttctgtggttacca 741
Query: 541 caaatatttccttggatttatcattacaaagacctgacatgaagctgtggatgtacatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 caaatatttccttggatttatcattacaaagacctgacatgaagctgtggatgtacatgc 801
Query: 601 agagcatgtacaagactctaggtccaagtcccacca 636
||||||||||||||||||||||||||||||||||||
Sbjct: 802 agagcatgtacaagactctaggtccaagtcccacca 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_b23.g1 MSMg01no322_b23.g1 CHROMAT_FILE:
MSMg01no322_b23.g1 PHD_FILE: MSMg01no322_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:01 2005
(563 letters)
>mm_chr16_7487509_7488471
Length = 963
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%)
Strand = Plus / Minus
Query: 1 agtaagataaccaggcattatgaatgaataagatatgtaataagccacagcattaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agtaagataaccaggcattatgaatgaataagatatgtaataagccacagcattaatatc 464
Query: 61 atgcaactctgtgggcttgatggaggtggacctccctaattttcattcctctctctaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atgcaactctgtgggcttgatggaggtggacctccctaattttcattcctctctctaatc 404
Query: 121 ctactctttctcattgctgaggataaaagagaccttctgtggttacagaaatttggcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctactctttctcattgctgaggataaaagagaccttctgtggttacagaaatttggcact 344
Query: 181 gccaagcacagtttcagtgaccagcactttggtatgggtatgtcctggagatagtgtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gccaagcacagtttcagtgaccagcactttggtatgggtatgtcctggagatagtgtgga 284
Query: 241 cttgtttttctccttttgtctttactctttttttctgagtcagcaagataattctataat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cttggagttctccttttgtctttactctttttttctgagtcagcaagataattctataat 224
Query: 301 cattacagagagagagaaaaatctgtctgagttgtttactgccctgtagtgaactgtact 360
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 223 cattagagagagagagaaaaatctgtctgagttgtttactggcctgtagtgaactgtact 164
Query: 361 aaaatgtagaggctcaaaacaacatgtatgtgtaaactatcaattcctgtgagccaggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aaaatgtagaggctcaaaacaacatgtatgtgtaaactatcaattcctgtgagccaggag 104
Query: 421 gcaggatatggccaaattggctttgccagtgcagattttacagactgtgatcagacaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gcaggatatggccaaattggctttgccagtgcagattttacagactgtgatcagacaaac 44
Query: 481 tagggtctcatcccaaggattaactagggagggatctgcttcc 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 tagggtctcatcccaaggattaactagggagggatctgcttcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
