Query= MSMg01no322_e07.b1 MSMg01no322_e07.b1 CHROMAT_FILE:
MSMg01no322_e07.b1 PHD_FILE: MSMg01no322_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:12 2005
(597 letters)
>mm_chr16_84549041_84550035
Length = 995
Score = 1009 bits (522), Expect = 0.0
Identities = 576/600 (96%), Gaps = 14/600 (2%)
Strand = Plus / Plus
Query: 4 ggaattcaatcactccctccattgacaccacctcccatagaaaaatcatcgccccatggc 63
||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaccactccatccattgacacc-cc-cccatagaaaaatcatcgccccatggc 261
Query: 64 ttcccattggggtgacaagatttcccaacccctgcttcctcctctttctttgacaggcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttcccattggggtgacaagatttcccaacccctgcttcctcctctttctttgacaggcat 321
Query: 124 tttgtttacagtatcttttgttctcctaggagttttgttgctttgcttttgttttaaggg 183
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 322 tttgtttacagtatcttttgttctcctgggagttttgttgctttgcttttgttttaaggg 381
Query: 184 gtttgcagtcagggatctgggtcggatttttagagatagactttcactaggtaaccccgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtttgcagtcagggatctgggtcggatttttagagatagactttcactaggtaaccccgg 441
Query: 244 gctgactcgcaagctccatgtgctcccttctcagcctcgggagaactaacatcactggct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gctgactcgcaagctccatgtgctcccttctcagcctcgggagaactaacatcactggct 501
Query: 304 tgcattactacactcagaagtccttcagatctcttctcagcttctgctttatagcaactc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgcattactacactcagaagtccttcagatctcttctcagcttctgctttatagcaactc 561
Query: 364 cacctgaaacaaacgctggtgcgcgagctagagcctgcaacagcaaggtcaggctaagaa 423
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 562 cacctgaaacaaaggctggtgcgcgagctagagcctgcaacatcaaggtcaggctaagaa 621
Query: 424 aggtcaggcagggttggcagtaaaactgccagagtgagcaagggaaaaacagacggtcgg 483
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 622 aggtcaggcagggttggcagtaaaactgccggagtgagcaagggaaaaacagacggtctg 681
Query: 484 tgggttatcgctgctgccaagaccgagaggaaatcaaattagaactcatcgggcatctat 543
|||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tggggtatcactgctgccaggaccgagaggaaatcaaattagaactcatcgggcatctat 741
Query: 544 tgtgtcccaggaacaacaacaactcctcctcctcctc---ctcctcct---cctcctcct 597
||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 742 tgtgtcccaggaacaac------tcctcctcctcctctccctcctccttttcctcctcct 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 995
Length adjustment: 10
Effective length of query: 587
Effective length of database: 985
Effective search space: 578195
Effective search space used: 578195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_e07.g1 MSMg01no322_e07.g1 CHROMAT_FILE:
MSMg01no322_e07.g1 PHD_FILE: MSMg01no322_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:12 2005
(516 letters)
>mm_chr16_84738275_84739188
Length = 914
Score = 783 bits (405), Expect = 0.0
Identities = 430/439 (97%), Gaps = 2/439 (0%)
Strand = Plus / Minus
Query: 78 tctctaatattaagaaagaactggcaagattttttaatgggttagggaagaacgggctgc 137
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 914 tctctaatattaagaaagaactggcaagattttttattgggttagggaagaacgggctgc 855
Query: 138 tgtaaatggagggattgaaggagtcagttgcattgtacatctttgttctattattatttt 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tgtaaatggagggattgaaggagtcagttgcattgtacatctttgttctattattatttt 795
Query: 198 ttaaaatctttttgcagtgctaggatcaaacctggagccatgagcgtgctaggcaagtat 257
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 794 ttaaaatctttttgcagtgctaggatcaaacccggagccatgagcgtgctaggcaagtat 735
Query: 258 tctcctacttggctacatccattggcttttgaacatctttccattcaactgccttttgta 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tctcctacttggctacatccattggcttttgaacatctttccattcaactgccttttgta 675
Query: 318 tttccagaggcgtctgacacacactggcaggttcctgggaagtcagatcacaaagaactt 377
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 674 tttccagaggcgtctgacacacactgggaggttcccgggaagtcagatcacaaagaactt 615
Query: 378 gataaagaatgaaagtagaggaaccatactgcttagtttcctggatcatcagagagggaa 437
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 614 gataaagaatgaaagtagaggaaccatactgcttaatttcctggatcagcagagagggaa 555
Query: 438 atatacactttttttttaacctgctttttattctttgttatttcacagcagtatgaacca 497
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atatacactttttttg--acctgctttttattctttgttatttcacagcagtatgaacca 497
Query: 498 ttgaaatagagccttgatg 516
|||||||||||||||||||
Sbjct: 496 ttgaaatagagccttgatg 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 914
Length adjustment: 10
Effective length of query: 506
Effective length of database: 904
Effective search space: 457424
Effective search space used: 457424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
