Query= MSMg01no323_e24.b1 MSMg01no323_e24.b1 CHROMAT_FILE:
MSMg01no323_e24.b1 PHD_FILE: MSMg01no323_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:43 2005
(606 letters)
>mm_chr16_50352649_50353654
Length = 1006
Score = 1096 bits (567), Expect = 0.0
Identities = 597/607 (98%), Gaps = 2/607 (0%)
Strand = Plus / Minus
Query: 1 gtgtgtgtgtgtgtgtgtgtgtgttgataatgggaacaaatcactatgtagctcagatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gtgtgtgtgtgtgtgtgtgtgtgttgataatgggaacaaatcactatgtagctcagatct 771
Query: 61 atgctgtccttaaactcagcattttctctcagccttctaggtatttgtctagctttttta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 770 atgctgtccttaaactcagcattttctctcagccttctaggtatttgtctagctttttaa 711
Query: 121 aaaattgtatttagtgaaaacaataggtacacatatatttccccaccattcct-gaagtg 179
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 710 aaaattgtatttagtgaaaataataggtacacatatatttccccaccatt-ctggaagtg 652
Query: 180 gaattccctcacctccttttcaatatagcaaagaaaatcaaatcactttataggcagatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaattccctcacctccttttcaatatagcaaagaaaatcaaatcactttataggcagatt 592
Query: 240 atagagaacatagcttagaatttcaggtagaattattaacattgcagtggatctttgaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 atagagaacatagcttagaatttcaggtagaattattaacattgcagtggatctttgaaa 532
Query: 300 gacagaaggagtctcctttcaggcaatttaggtatctttctgctgaagacctgagttgct 359
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gacagaaggagtctcctttcaagcaatttaggtatctttctgctgaagacctgagttgct 472
Query: 360 gcctgatgacagcagtgagtgacatggtgttctatgatttttctctccatgtgctatttt 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 471 gcctgatgacagcagtgagtgacatggtgttctttgatttttctctccatgtgctatttt 412
Query: 420 ggtcctggttttgtacatacattagaaagagaaatttactgggtaggattacacctttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggtcctggttttgtacatacattagaaagagaaatttactgggtaggattacacctttgt 352
Query: 480 aagtcacttcagcaccatagcagttcactcaattccgctagcattgaggtcaatggacca 539
||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||
Sbjct: 351 aagtcacttcagcaccatagcagttcactcagtttcactagcattgaggtcaatggacca 292
Query: 540 aatacatctggtcagccaacggaagcagtgcacccttataaatgcttttagtttttaaat 599
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 291 aatacatctggtcagccaacggaagcagtgcacccttataaatgcttttattttttaaat 232
Query: 600 attccag 606
|||||||
Sbjct: 231 attccag 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_e24.g1 MSMg01no323_e24.g1 CHROMAT_FILE:
MSMg01no323_e24.g1 PHD_FILE: MSMg01no323_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:43 2005
(675 letters)
>mm_chr16_50189278_50190352
Length = 1075
Score = 1237 bits (640), Expect = 0.0
Identities = 664/672 (98%)
Strand = Plus / Plus
Query: 1 atttttatctaaatacagctttggttttgacttgtaataggagattttggtggagccagc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 atttttatctaaatacagctttggttttgacttgtaatacgagattttggtggagccagc 260
Query: 61 atcaatatgcaaaatgcttgagattctactttaaaaggctttggatatttagggacttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaatatgcaaaatgcttgagattctactttaaaaggctttggatatttagggacttat 320
Query: 121 gtaaagaccactgctctatttttaacacatgattgagccaggacagaatatagaagactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaagaccactgctctatttttaacacatgattgagccaggacagaatatagaagactt 380
Query: 181 tattctatgaagcagtggctaaaaatttccagtatgtcaagaattatatacatttgggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattctatgaagcagtggctaaaaatttccagtatgtcaagaattatatacatttgggga 440
Query: 241 aattgtatcaatactgctttttctattaagtgcattcctttaaaagcttcaaattctgtg 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 aattgtatcaatactgctttttctattaagtgcattccagtaaaagcttcaaattctgtg 500
Query: 301 gccaatcattacctaatttcgtatctattacgtgtctactgctttcatatgtcagtgcat 360
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 501 gccaatcattacctaatttcgtatctattacatgtctactgcttttatatgtcagtgcat 560
Query: 361 ttctgcttacttctggaagaactcgtgcttgtttaattggccattcataaactccactaa 420
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 561 ttctgcttacttctggaagaactcatgcttgtttaattggccattcataaactccactga 620
Query: 421 taccatcagaaaaatactcatttgagaatatttcttgggcacatttcatgctgcctttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taccatcagaaaaatactcatttgagaatatttcttgggcacatttcatgctgcctttaa 680
Query: 481 aattaatttttttctttatgtagagcatccaagccctacttacataaatttctttttcct 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 aattaatttttttctttatgtagagtatccaagccctacttacataaatttctttttcct 740
Query: 541 tcatccttcaccttttagagacttttaatcatgtttttttcatctttctctcatgtacaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcatccttcaccttttagagacttttaatcatgtttttttcatctttctctcatgtacaa 800
Query: 601 ccccacaataatacctgttgcaaaatccctaaggtaaaggtgggtaagtcacaaatttac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccccacaataatacctgttgcaaaatccctaaggtaaaggtgggtaagtcacaaatttac 860
Query: 661 aacttttttttt 672
||||||||||||
Sbjct: 861 aacttttttttt 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
