Query= MSMg01no328_a15.b1 MSMg01no328_a15.b1 CHROMAT_FILE:
MSMg01no328_a15.b1 PHD_FILE: MSMg01no328_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:04 2005
(717 letters)
>mm_chr16_54972219_54973334
Length = 1116
Score = 1317 bits (681), Expect = 0.0
Identities = 705/713 (98%), Gaps = 2/713 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttatattgtttttccttcaaatataaggaaatgttatgaaacaaaatattac 63
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttatattg-ttttccttcaaataaaaggaaatgttatgaaacaaaatattac 262
Query: 64 taatgagaaaaaattgaaaacaatatggatttgaattaataatgtgtttataggaagtat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taatgagaaaaaattgaaaacaatatggatttgaattaataatgtgtttataggaagtat 322
Query: 124 cctatgctcacttcagcatcacatatactaaaattggaacaatacagagaagattagtat 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 323 cctatgctcgcttcagcatcacatatactaaaattggaacaatacagagaagattagcat 382
Query: 184 ggcccctgcacaaggatgacatgtaaattcatgaagtattccatatttttccaagtccat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggcccctgcacaaggatgacatgtaaattcatgaagtattccatatttttccaagtccat 442
Query: 244 aaaggcagacttatcagtattacaatggacttctcaccagagactatggaagctagaaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaaggcagacttatcagtattacaatggacttctcaccagagactatggaagctagaaga 502
Query: 304 tcctgggcagatgtcatacagaccctaagagaacacaaatgtcagcccagactactatac 363
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcctgggcagatgtcatacataccctaagagaacacaaatgtcagcccagactactatac 562
Query: 364 ccagcaaaactctcaattaccatagatggagaaaaccagttattccatgagaaaaacaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ccagcaaaactctcaattaccatagatggagaaaaccagttattccatgagaaaaacaaa 622
Query: 424 tgtacacaatatctctccactaattcagccctacaaaagataatagatggaaaactccaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgtacacaatatctctccactaattcagccctacaaaagataatagatggaaaactccaa 682
Query: 484 cacaagaagggaagccacaccctaaaaaaagcaagaaagtaatcttctttcaacaaacca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cacaagaagggaagccacaccctaaaaaaagcaagaaagtaatcttctttcaacaaacca 742
Query: 544 aaaagaagataaccacaaaaaaacccccataattccaccaataacaacagaagtaacagg 603
||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 743 aaaagaagataaccacaaaaaaaaccc-ataattccaccgataacaacagaagtaacagg 801
Query: 604 aagcaacaatcagttttccttaatatctcttaatatcaatggactcagtttcctaataaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aagcaacaatcagttttccttaatatctcttaatatcaatggactcagtttcctaataaa 861
Query: 664 aagacatagactaacagacggctatgcaaataggaccccagcatattgctgca 716
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 aagacatagactaacagacggctatgcaaataggaccccagcatattgctgca 914
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 717
Length of database: 1116
Length adjustment: 10
Effective length of query: 707
Effective length of database: 1106
Effective search space: 781942
Effective search space used: 781942
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no328_a15.g1 MSMg01no328_a15.g1 CHROMAT_FILE:
MSMg01no328_a15.g1 PHD_FILE: MSMg01no328_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:04 2005
(268 letters)
>mm_chr16_55049516_55050183
Length = 668
Score = 242 bits (125), Expect = 2e-68
Identities = 128/129 (99%)
Strand = Plus / Minus
Query: 138 agatcctgatgactgtggaagcacaactgaacttttgacttgtgtatttcttgaattctc 197
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agatcctaatgactgtggaagcacaactgaacttttgacttgtgtatttcttgaattctc 407
Query: 198 tttataattaaatcttaatggaagatagcgttacatctgatttggagataaggaaggagg 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttataattaaatcttaatggaagatagcgttacatctgatttggagataaggaaggagg 347
Query: 258 gtgtggtgg 266
|||||||||
Sbjct: 346 gtgtggtgg 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
