Query= MSMg01no329_o06.b1 MSMg01no329_o06.b1 CHROMAT_FILE:
MSMg01no329_o06.b1 PHD_FILE: MSMg01no329_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:30 2005
(369 letters)
>mm_chr16_56680625_56681393
Length = 769
Score = 582 bits (301), Expect = e-170
Identities = 319/325 (98%)
Strand = Plus / Minus
Query: 5 gaattcaccaagatctctaatgctgcctagaagagaaaggactgttactctggccaactt 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaattcaccaagagctataatgctgcctagaagagaaaggactgttactctggccaactt 266
Query: 65 caggaaaggagatttgataggggaaagtaagaagtgttagggagtaggctacaatactga 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 caggaaaggagatttgataggggaaagtaagaagtgttagggagtgggctacaatactga 206
Query: 125 ttgtggtggttaaatgagaatgcccccaccctgtatgttcatatatttaaattcacagtc 184
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 ttgtggtggttaaatgagaatgcccccaccccatatgttcatatatttaaattcacagtc 146
Query: 185 cctagttgacggaactgtttgggaaggattagggactgtgaacttgtttgaggagatagg 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cctagttgacagaactgtttgggaaggattagggactgtgaacttgtttgaggagatagg 86
Query: 245 tcactggctttgggctctgaggtttcgaaagactcctggtattcccagttagttctatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tcactggctttgggctctgaggtttcgaaagactcctggtattcccagttagttctatct 26
Query: 305 tctacttgtggataaagatgtcagc 329
|||||||||||||||||||||||||
Sbjct: 25 tctacttgtggataaagatgtcagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_o06.g1 MSMg01no329_o06.g1 CHROMAT_FILE:
MSMg01no329_o06.g1 PHD_FILE: MSMg01no329_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:30 2005
(429 letters)
>mm_chr16_56516400_56517228
Length = 829
Score = 741 bits (383), Expect = 0.0
Identities = 416/427 (97%), Gaps = 2/427 (0%)
Strand = Plus / Plus
Query: 4 tctcatgttcctttcaccgtgaatgttcttctttgacatacctgaatgattggcccctta 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tctcatgttcctttcaccttgaatgttcttctttgacatacctgaatgattggcccctta 263
Query: 64 acttcctttgtgccttctcaagcagaggctgtgcatctgcacgcagtcacccctcctaat 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 264 acttcctttgtgccttctcaagcagaggctgtgcgtctgcacgcagtcacccctcctaat 323
Query: 124 cagcttccagctccattttccttcatggtgttttccaaagtctgcagttgtcagattgct 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 cagcttccagctccattttccttcatggtgttttccaaagtctgcacttgtcagattgct 383
Query: 184 tagattatgtgttggtaactatctcaactcctgatggcttgaaaacaacagaagcacatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagattatgtgttggtaactatctcaactcctgatggcttgaaaacaacagaagcacatg 443
Query: 244 tattgctcaatcacatgtttattaatatgactcgctttctgttctttgtaataaccagga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tattgctcaatcacatgtttattaatatgactcgctttctgttctttgtaataaccagga 503
Query: 304 ccaaggctccccctggtcagtgtattctggccagtgcaccacggaacgctaggaaacgtt 363
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 504 ccaaggctccccctggtcagtgtattctggccagtgcaggagggaacgctaggaaacgtt 563
Query: 364 cttacactaacaattctcgctgctaacctgaccgcttcccttaagtgaatggccta-tca 422
|||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| | |
Sbjct: 564 cttacactaacagttctcgatgctaacctgacctcttcccttaagtgaatggcctagt-a 622
Query: 423 ctgaggg 429
|||||||
Sbjct: 623 ctgaggg 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
