Query= MSMg01no330_b16.b1 MSMg01no330_b16.b1 CHROMAT_FILE:
MSMg01no330_b16.b1 PHD_FILE: MSMg01no330_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:46 2005
(320 letters)
>mm_chr16_15941666_15942386
Length = 721
Score = 507 bits (262), Expect = e-148
Identities = 301/314 (95%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactgtgtcctgcaaggtaactgctgttgtggaaaccctcttcaggtgtgagcc 63
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaattcactgtgccctgtaaggtaactgctgttgtggaaaccctcttcaggtgtgagcc 458
Query: 64 agctcatctctaagccccagctctatgtggacgacagtgagtgggagagtacatccagcc 123
|||||||| ||||||| |||||||||||||| | ||||||||||||||| ||||||||||
Sbjct: 457 agctcatccctaagccacagctctatgtggaggtcagtgagtgggagagcacatccagcc 398
Query: 124 agcatgaactaagggggaacagtactcagagcaggggtctggaggcatgacccaggccca 183
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 397 agcatgaactaagggggaacggtactcagagcaggggcctggaggcatgacccaggccca 338
Query: 184 tatagcaaaccagggcaaaataacaaacaaaagtagcctccagctcctttggctatttga 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tatagcaaaccagggcaaaaaaacaaacaaaagtagcctccagctcctttggctatttga 278
Query: 244 gataaaagcaatagtcaagtaaactaggaaagagtaatatcagttccccacc-ctccctt 302
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 277 gataaaagcaatagtcaagtaaactaggaaagagtaatatcagttccccacctgtccctt 218
Query: 303 cgtagtataaccaa 316
|||||||||||||
Sbjct: 217 tgtagtataaccaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_b16.g1 MSMg01no330_b16.g1 CHROMAT_FILE:
MSMg01no330_b16.g1 PHD_FILE: MSMg01no330_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:46 2005
(291 letters)
>mm_chr16_15756002_15756692
Length = 691
Score = 503 bits (260), Expect = e-147
Identities = 284/292 (97%), Gaps = 3/292 (1%)
Strand = Plus / Plus
Query: 1 ctgtggagcctacgttcaaggaattttgggtatatcctggcaagacctctctcccaatct 60
|||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 202 ctgtggagcccacgttcaaggaattttgggtatatcctggcaagacct-t-tcccaatct 259
Query: 61 tctctaaagtattttttccttaaatcttgctttttttt-attattagatcaaatttaata 119
||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 260 tctctaaagtaatttttccttaaatctcgctttttttttattattagatcaaatttaata 319
Query: 120 tacataatatatataaatatgaacaatattgaattattcaaacacaagcaactaattagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 tacataatatatataaatatgaacaatattgaattattcaaacacaagcaactgattagt 379
Query: 180 gacattcaacgtaaaatgttacagaaaataatctattcacctactaaatatgaatgatga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gacattcaacgtaaaatgttacagaaaataatctattcacctactaaatatgaatgatga 439
Query: 240 agttccagtaaagttatattccatttataattatcttaatactcttttttaa 291
||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 agttccagtaaagttatattccatttataattatcctaatactcttttttaa 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
