Query= MSMg01no330_n16.b1 MSMg01no330_n16.b1 CHROMAT_FILE:
MSMg01no330_n16.b1 PHD_FILE: MSMg01no330_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:39 2005
(189 letters)
>mm_chr16_30567812_30568400
Length = 589
Score = 331 bits (171), Expect = 2e-95
Identities = 183/189 (96%), Gaps = 4/189 (2%)
Strand = Plus / Plus
Query: 1 agaatgcagttactggctcatttaaacaggctcacaccccaaccatcaccttaaatgcat 60
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaatgcggttacttgctcatttaaacaggctcacaccccaaccatcaccttaaatgcat 260
Query: 61 cctttaaaataacagaccaaactgggtcggtggtggcccatacctttatttatttattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctttaaaataacagaccaaactgggtcggtggtggcccatacctttatttatttattta 320
Query: 121 tttaaattattatttatttaacgtatatgaatacactgtagctgttttcagacacaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ----aattattatttatttaacgtatatgaatacactgtagctgttttcagacacaccag 376
Query: 181 aagaaggcg 189
|||||||||
Sbjct: 377 aagaaggcg 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_n16.g1 MSMg01no330_n16.g1 CHROMAT_FILE:
MSMg01no330_n16.g1 PHD_FILE: MSMg01no330_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:39 2005
(244 letters)
>mm_chr16_30721593_30722238
Length = 646
Score = 406 bits (210), Expect = e-118
Identities = 237/246 (96%), Gaps = 2/246 (0%)
Strand = Plus / Minus
Query: 1 tgaactcaggtccccctgcttgcatgcaatgacttgccttttttaccca-ccatatccct 59
|||||||||||||||||||||||||||||||||||||||| | || | |||||| |||
Sbjct: 446 tgaactcaggtccccctgcttgcatgcaatgacttgccttgctgactgagccatatacct 387
Query: 60 gggcccagtgccttttattaaaatagaagtcaccatcaaat-aaaaaaaagttatcttta 118
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 386 gggcccagtgccttttattaaaatagaagtcaccatcaaataaaaaaaaagttatcttta 327
Query: 119 tgatgcctctgctaataagataattggtagatccggatggaaaaaaaatccttcccatag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgatgcctctgctaataagataattggtagatccggatggaaaaaaaatccttcccatag 267
Query: 179 tgttgccagatgagctgggcgccctttgtcctgaggttctgaggtaccctggcatactgg 238
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 266 tgttgccagatgagctgggcgccctttgtcctgaggtgctgaggtaccctggcatactgg 207
Query: 239 gtactc 244
||||||
Sbjct: 206 gtactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 646
Length adjustment: 9
Effective length of query: 235
Effective length of database: 637
Effective search space: 149695
Effective search space used: 149695
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
