Query= MSMg01no331_c20.b1 MSMg01no331_c20.b1 CHROMAT_FILE:
MSMg01no331_c20.b1 PHD_FILE: MSMg01no331_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:02 2005
(249 letters)
>mm_chr16_31038281_31038929
Length = 649
Score = 455 bits (235), Expect = e-132
Identities = 244/249 (97%), Gaps = 4/249 (1%)
Strand = Plus / Plus
Query: 1 catgtctgcctatgagctgcctgcttcccaccccagttaaatgctttcccaatacaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 catgtctgcctatgagctgcctgcttcccaccccagttaaatgctttcccaatacaagcc 264
Query: 61 ccaatcaaacactttataagaattgtcatggtcacgatgtctcataacaatagaacactg 120
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 ccaatcaaacactttataagaattgtcatggtcacgatgtctcatcacaatagaacact- 323
Query: 121 actaagacagggagacagaccacattctaaccatagcagttctttagtattccatacaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ---aagacagggagacagaccacattctaaccatagcagttctttagtattccatacaag 380
Query: 181 ttaggtgataagtttttaattctttactagaaagaaatgttaattgtatgaaatgacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaggtgataagtttttaattctttactagaaagaaatgttaattgtatgaaatgacagg 440
Query: 241 tatgcaatg 249
|||||||||
Sbjct: 441 tatgcaatg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no331_c20.g1 MSMg01no331_c20.g1 CHROMAT_FILE:
MSMg01no331_c20.g1 PHD_FILE: MSMg01no331_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:02 2005
(666 letters)
>mm_chr16_31214009_31215074
Length = 1066
Score = 901 bits (466), Expect = 0.0
Identities = 499/510 (97%)
Strand = Plus / Minus
Query: 1 ctaatatatgttctatatatggcacatctatttgtaaccaggccctatctacacacatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ctaatatatgttctatatatggcacatctatttgtaaccaggccctatctacacacatgg 451
Query: 61 gcacacagacaagcatcagcttctgcccttgaatttacattcaaggcagacagtgtggcc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtacacagacaagcatcagcttctgcccttgaatttacattcaaggcagacagtgtggcc 391
Query: 121 agcatcatggtggaggctcacacagggacattagaagggtgtgtcagaggcccaaaccca 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agcatcatggtcgaggctcacacagggacattagaagggtgtgtcagaggcccaaaccca 331
Query: 181 gaactatagtctctgggagaaggcacagaagtggattgcagatgagtagcgggtatcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 330 gaactatagtctctgggagaaggcacagaagtggattgcagatgagtagtgggtatcctg 271
Query: 241 ctgcagaccttctccttcaacatgccaggtggtcactccttactgacttctaccctgcag 300
|||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 270 ctgcagacctacgccttcaacgtgccaggtggtcagtccttactgacttctaccctgcag 211
Query: 301 cccagaggccggcttttaaggagggaatataggttgaatgagattccacggtggcgtcct 360
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 210 cccagaggccggcttttaaggagggaatataggttgaatgagattctagggtggcgtcct 151
Query: 361 agtccaaaatgattggtgtccttacaagcagaggaagggccatgccacagagccatgcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agtccaaaatgattggtgtccttacaagcagaggaagggccatgccacagagccatgcat 91
Query: 421 acaggaaaaactgaagattctgcagtaaggaggccattgtgaggcaaagggagaggctca 480
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 acaggaaagactgaagatcctgcagtaaggaggccattgtgaggcaaagggagaggctca 31
Query: 481 gaagaaacccaggttaccaaaacctctatt 510
||||||||||||||||||||||||||||||
Sbjct: 30 gaagaaacccaggttaccaaaacctctatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
