Query= MSMg01no332_f02.b1 MSMg01no332_f02.b1 CHROMAT_FILE:
MSMg01no332_f02.b1 PHD_FILE: MSMg01no332_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:38 2005
(611 letters)
>mm_chr16_51784489_51785496
Length = 1008
Score = 1127 bits (583), Expect = 0.0
Identities = 603/611 (98%), Gaps = 3/611 (0%)
Strand = Plus / Plus
Query: 1 agacattcatgtcttcacatgcacaagaactcacctcctttgagagcatcaccagtcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacattcatgtcttcacatgcacaagaactcacctcctttgagagcatcaccagtcttc 260
Query: 61 gccgtagcagagtggggacagcagctttcgttccccactaagagttctcaaacaccgttg 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accttagcagagtggggacagcagctttcgttccccactaagagttctcaaacaccgttg 320
Query: 121 actctgattgtaaatcattaccagaattattggtaatagtttcagtcccccacctttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actctgattgtaaatcattaccagaattattggtaatagtttcagtcccccacctttgtg 380
Query: 181 cttcccgccttcgttctcttcctcatttggtttagttattcaagtcattgacagtaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcccgccttcgttctcttcctcatttggtttagttattcaagtcattgacagtaatgc 440
Query: 241 tagggacaaatagctggcattgaatagagtataaatactttggccctctttctctctcct 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tagggacaaatagctggcattgaatagagtaaaaatactttggccctctttctctctcct 500
Query: 301 gccattctctgtcaccatagagctcctgggaacgccatcttgaggaatgggtttatcctt 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 gccattctctgtcaccatagagctcctgggaaagccatcttgaggaatgggtttatcctt 560
Query: 361 aatactggaaatccatgctttgtgaaatgaaaaaaaaaaaaaaaggacaacagtgatttg 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 aatactggaaatccatgctttgtgaaatgaaaaaaaaaaaa---ggacaacagtgatttg 617
Query: 421 ctttaatgagatttgtttccctttcattaatgatgattgaagcaatgaaggaaattaccc 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 618 ctttaatgagatttgtttccctttcattaatgatgattaaagcaatgaaggaaattaccc 677
Query: 481 acactctaaaatgagagcaaagcaccctagaatttgctattaaatatccagtaatatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 acactctaaaatgagagcaaagcaccctagaatttgctattaaatatccagtaatatgca 737
Query: 541 acctgaccttgggctgttcactcagtatatctgtgaaaatgaagagaatgttattgtcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 acctgaccttgggctgttcactcagtatatctgtgaaaatgaagagaatgttattgtcat 797
Query: 601 tgaaagaatat 611
|||||||||||
Sbjct: 798 tgaaagaatat 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1008
Length adjustment: 10
Effective length of query: 601
Effective length of database: 998
Effective search space: 599798
Effective search space used: 599798
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_f02.g1 MSMg01no332_f02.g1 CHROMAT_FILE:
MSMg01no332_f02.g1 PHD_FILE: MSMg01no332_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:38 2005
(274 letters)
>mm_chr16_51953213_51953886
Length = 674
Score = 499 bits (258), Expect = e-146
Identities = 270/274 (98%)
Strand = Plus / Minus
Query: 1 ccatcagtgacatatgacccagtagcatcagcagtgaccatgtagatccccccaatcact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 302 ccatcagtgacatatgacccagtagcatcagcagtaaccatgtagatccccccaatcact 243
Query: 61 agtaatcttcactcaaaagtgtatgattttatgattgtacgcaggacagttcttgaggca 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 242 agtaatcttcactcaaaagtgtatgattttataattgtacgcaggacagttcttgaggca 183
Query: 121 aaagatgctggtttaactggtggttggcatgtagaagaatgcaaattgatccactcttat 180
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 182 aaagatgctggttcaactggtggttggcatgtggaagaatgcaaattgatccactcttat 123
Query: 181 ctccttgtacaaagctcaagtccaagtggatcaagaaccttcacataaaaacagatacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctccttgtacaaagctcaagtccaagtggatcaagaaccttcacataaaaacagatacac 63
Query: 241 tgaatctaataacaaagaaagtggagaagagcct 274
||||||||||||||||||||||||||||||||||
Sbjct: 62 tgaatctaataacaaagaaagtggagaagagcct 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
