Query= MSMg01no332_o24.b1 MSMg01no332_o24.b1 CHROMAT_FILE:
MSMg01no332_o24.b1 PHD_FILE: MSMg01no332_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:55 2005
(735 letters)
>mm_chr16_24793897_24795031
Length = 1135
Score = 1398 bits (723), Expect = 0.0
Identities = 732/735 (99%)
Strand = Plus / Plus
Query: 1 agaaaggaaattgaacatctgatgatgtgtattgtttaattgattattttatagtttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaaggaaattgaacatctgatgatgtgtattgtttaattgattattttatagtttcat 260
Query: 61 acaacatgataaaatatattgatcacgtttaccctaactcttccaagatctatctttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaacatgataaaatatattgatcacgtttaccctaactcttccaagatctatctttacc 320
Query: 121 tccctatctgttgtcaacttcatgttttttgtatttaatactcccatttcactctaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctatctgttgtcaacttcatgttttttgtatttaatactcccatttcactctaatct 380
Query: 181 gtgctgcccgtttaatgggaccttccatggggcatgctcagccttccagaaccacaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgctgcccgtttaatgggaccttccatggggcatgctcagccttccagaaccacaccct 440
Query: 241 taaggaaaactgactcttcctctccacatgcccgccctcctcattagggttggaacttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 taaggaaaactgactcttcctctccacatgcccgccctcctcattagggttggggcttgt 500
Query: 301 gaacccttcagcatctcatgctacgttggctaggtcttgtgtacattttatacaggcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaacccttcagcatctcatgctacgttggctaggtcttgtgtacattttatacaggcaaa 560
Query: 361 tatagcacccatgagcaatgagtgcagtggtgtgttgtatccagaagacactttattact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatagcacccatgagcaatgagtgcagtggtgtgttgtatccagaagacactttattact 620
Query: 421 ctgatattttatacttactgtggtgccagtgattggacctggggcctcatgcatgctagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgatattttatacttactgtggtgccagtgattggacctggggcctcatgcatgctagg 680
Query: 481 caagtttgggacagttcagctctaccgccagccccattcaaagagaattcattttactct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagtttgggacagttcagctctaccgccagccccattcaaagagaattcattttactct 740
Query: 541 gcagtcacgtcacgttcatgggcatctccttgtatttgggtaatgtttagtctcttttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcagtcacgtcacgttcatgggcatctccttgtatttgggtaatgtttagtctcttttac 800
Query: 601 tctgtagtccagggtgacctggaattactaggtagcgcaggctgtcttaaaccttacagt 660
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 801 tctgtagtccagggtgacctggaattactaggtagcacaggctgtcttaaaccttacagt 860
Query: 661 actgtgttagagcaaacagagcctcatcttatgaatcctgaacatgtaagctattgaggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 actgtgttagagcaaacagagcctcatcttatgaatcctgaacatgtaagctattgaggt 920
Query: 721 tatgtatataagctt 735
|||||||||||||||
Sbjct: 921 tatgtatataagctt 935
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 735
Length of database: 1135
Length adjustment: 10
Effective length of query: 725
Effective length of database: 1125
Effective search space: 815625
Effective search space used: 815625
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no332_o24.g1 MSMg01no332_o24.g1 CHROMAT_FILE:
MSMg01no332_o24.g1 PHD_FILE: MSMg01no332_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:56 2005
(667 letters)
>mm_chr16_24949435_24950501
Length = 1067
Score = 1230 bits (636), Expect = 0.0
Identities = 660/668 (98%), Gaps = 2/668 (0%)
Strand = Plus / Minus
Query: 1 acaaatgtttatatcaaaaacagttgtggactctttatcaaaagcaaaaagaattacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 acaaatgtttatatcaaaaacagttgtggactctttatcaaaagcaaaaagaattacaca 637
Query: 61 gaaataagatgtgtgcatgaggccattagaaaggcttgccttctttgctataaagatggg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 636 gaaataagatgtgtgcatgaggccattagaaaggcgtgccttctttgctataaagatggg 577
Query: 121 gcagaaggctggtgctggaatattaaaagtcgtctgactgatgggtaccttcctgcagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gcagaaggctggtgctggaatattaaaagtcgtctgactgatgggtaccttcctgcagcc 517
Query: 181 atgttgcctgtcctttttccattgacatcttggtgagactttccttatgttaacagagcg 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atgttgcctgtcctttttccactgacatcttggtgagactttccttatgttaacagagcg 457
Query: 241 tctttttggggtacctctgctaccacgggcagggtacatcctacgctggttcctcactag 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcttttgggggtacctctgctaccacgggcagggtacatcctacgctggttcctcactag 397
Query: 301 ctatgacctcgtgagctatcatagctagtgctggattcgctctgcctcc-ttgggaatag 359
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 396 ctatgacctcgtgagctaccatagctagtgctggattcgctctgcctcctttggg-atag 338
Query: 360 tttcagtatataaattgtcaacctgtatatctgttttcagatgagagaaggaagcacaga 419
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tttcagtatataaattgttaacctgtatatctgttttcagatgagagaaggaagcacaga 278
Query: 420 aaatactcagaagtaggtggggattagccttgccagaaactcttcctaggatacttggtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaatactcagaagtaggtggggattagccttgccagaaactcttcctaggatacttggtt 218
Query: 480 cgacatgtctcccggggctcagttgcctcatctgcaaactgggaaggataagtgaatctg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cgacatgtctcccggggctcagttgcctcatctgcaaactgggaaggataagtgaatctg 158
Query: 540 tcatacgctatgaactgtggtgcccattcatctgtgacttgggagctattggcacagagt 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tcatactctatgaactgtggtgcccattcatctgtgacttgggagctattggcacagagt 98
Query: 600 tctactgattacacaaatcctcttactgacagccatgacaagaactaggctgttgtatct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tctactgattacacaaatcctcttactgacagccatgacaagaactaggctgttgtatct 38
Query: 660 gacttatg 667
||||||||
Sbjct: 37 gacttatg 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
