TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCAGGACTCCGCGGAA
TTCACTCTTTATGCCAGAAAGGCCTCTGGCTCCTGAGCACTGAGATTAAA
GGCGTGTGCATCACTGCCCGGCACCATTTTCTCTCTAAGGAGCTACCCAA
GCTTTACTGCAGGAGAATACCTTCTCTAATGTATTCTCTGGTTTTGTGTT
GCTTAAGTGGTTCTTCTAGATCTCATCACTAAAGATGAAGTATAGATGAT
TGTCTTATAATTCCCACCTATAGCAGTACATTTAAACAGATGCTATCATT
ACAGTGCTTTTTATTCATACTTTTATAATTCTCATTAGTATCTGCTATAG
TATTCAAGTGACTATGCCTCCCTTGTCCTAGATCTTTGATTCTACTAATA
CAAGTTCCTTGTTGCTTTGCCTGTTTTTCTTTGCTAGTAGCATAAGCTCT
CCACCACTAAGCTGTAGCTACAGGCCTTGTGGTTTTTACTTTTTATATTT
GAGATAGGGTTGTGTAGATGGGTAGCCTTGGATTTGCTTTCTGAATAGCT
AGGATTATAGGCATAAAAGACACCCAGGCCTGCCTTAAATATGAATTTGT
AAAAGGTTTATAGTCTGGACTTTATTATAATTGTGAGGGATATGTAGACG
TTTCATGGTTCCTTTTGTAGTTCCATGAGATATCAAGGCAGAATAAAAAT
TCTAAAGATATTTAAAGGAAACCAGAGTGATTGTACTTTAATTTTCTCTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATTAACTGAAGAAAATGACATGCAAACAGAGCA
GGCATACATCAGGGACAGGGCTCAATTACACTGAATTGCTAGTAAGCCTT
AGGACTGAAAGCACCAAAGTACTAGGAGCACAGACTGCACCAGTCACAAT
GCATGCCAGGGGCCACTCATTTTCCTGGTACATTTCCCACCAGATACACC
TTTCTATAGCCCAGAACTGTCTAGCCCACAATGTTCTTTGGTGCAGACTG
CCCTGTTTAATGCGTAAAAAGGGAAGACAAAGCCTTTGGAGCTGACACTG
AAATGGAGCAGGCTCCAGGACTCCCACCAGCCTACCCAACCCCTGCTGGA
GAGTGTAGACAGCACCAACCCAGCAACAATAAGGTTTGATCTGCACATAA
AAGGAAGCAAGACAAGAGGTCCTATAGGAGACAACAGAGCAAATGTCCTG
GGGAGGAAAGGAGCAGGATGCTCTGATGGGACAGAAATGGCCAGGCTATG
TGGAGAAAACAGAATAGAGATGATAAAATATTAATTGGGACTGTTCATAT
TTGTCTATATGGTTTGCCTCAGAAAGGATTCTCTTAAGTGCTGGGAGGCC
AACTCAAGGCTTTGTCATGATGATAGAGGACTTTAAGCAGGACATAAATA
ACTCCCTTACAGGAGAACACAGCTAAACATCTAGAAACCC

Query= MSMg01no333_d17.b1 MSMg01no333_d17.b1 CHROMAT_FILE:
MSMg01no333_d17.b1 PHD_FILE: MSMg01no333_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:22 2005
         (677 letters)



>mm_chr16_13783275_13784351
          Length = 1077

 Score = 1270 bits (657), Expect = 0.0
 Identities = 672/677 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcctctggctcctgagcactgagattaaaggcgtgtgcatcactgcccggcaccattttc 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctctggctcctgagcactgggattaaaggcgtgtgcatcactgcccggcaccattttc 260

                                                                       
Query: 61  tctctaaggagctacccaagctttactgcaggagaataccttctctaatgtattctctgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctaaggagctacccaagctttactgcaggagaataccttctctaatgtattctctgg 320

                                                                       
Query: 121 ttttgtgttgcttaagtggttcttctagatctcatcactaaagatgaagtatagatgatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgtgttgcttaagtggttcttctagatctcatcactaaagatgaagtatagatgatt 380

                                                                       
Query: 181 gtcttataattcccacctatagcagtacatttaaacagatgctatcattacagtgctttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcttataattcccacctatagcagtacatttaaacagatgctatcattacagtgctttt 440

                                                                       
Query: 241 tattcatacttttataattctcattagtatctgctatagtattcaagtgactatgcctcc 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcatacttttagaattctcattagtatctgctatagtattcaagtgactatgcctcc 500

                                                                       
Query: 301 cttgtcctagatctttgattctactaatacaagttccttgttgctttgcctgtttttctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 501 cttgtcctagatctttgattctactaatacaagttccttgttgctttggttgtttttctt 560

                                                                       
Query: 361 tgctagtagcataagctctccaccactaagctgtagctacaggccttgtggtttttactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctagtagcataagctctccaccactaagctgtagctacaggccttgtggtttttactt 620

                                                                       
Query: 421 tttatatttgagatagggttgtgtagatgggtagccttggatttgctttctgaatagcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttatatttgagatagggttgtgtagatgggtagccttggatttgctttctgaatagcta 680

                                                                       
Query: 481 ggattataggcataaaagacacccaggcctgccttaaatatgaatttgtaaaaggtttat 540
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggattataggcaaaaaagacacccaggcctgccttaaatatgaatttgtaaaaggtttat 740

                                                                       
Query: 541 agtctggactttattataattgtgagggatatgtagacgtttcatggttccttttgtagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtctggactttattataattgtgagggatatgtagacgtttcatggttccttttgtagt 800

                                                                       
Query: 601 tccatgagatatcaaggcagaataaaaattctaaagatatttaaaggaaaccagagtgat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tccatgagatatcaaggcagaataaaaattctaaagatatttaaaggaaaccagagtgat 860

                            
Query: 661 tgtactttaattttctc 677
           |||||||||||||||||
Sbjct: 861 tgtactttaattttctc 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no333_d17.g1 MSMg01no333_d17.g1 CHROMAT_FILE:
MSMg01no333_d17.g1 PHD_FILE: MSMg01no333_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:22 2005
         (621 letters)



>mm_chr16_13959117_13960137
          Length = 1021

 Score = 1185 bits (613), Expect = 0.0
 Identities = 619/621 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attaactgaagaaaatgacatgcaaacagagcaggcatacatcagggacagggctcaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 attaactgaagaaaatgacatgcaaacagagcaggcatacatcagggacagggctcaatt 762

                                                                       
Query: 61  acactgaattgctagtaagccttaggactgaaagcaccaaagtactaggagcacagactg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 acactgaattgctagtaagccttaggactgaaagcaccaaagtactaggagcacagactg 702

                                                                       
Query: 121 caccagtcacaatgcatgccaggggccactcattttcctggtacatttcccaccagatac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 caccagtcacaatgcatgccaggggccactcattttcctggtacatttcccaccagatac 642

                                                                       
Query: 181 acctttctatagcccagaactgtctagcccacaatgttctttggtgcagactgccctgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 acctttctatagcccagaactgtctagcccacaatgttctttggtgcagactgccctgtt 582

                                                                       
Query: 241 taatgcgtaaaaagggaagacaaagcctttggagctgacactgaaatggagcaggctcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 taatgcgtaaaaagggaagacaaagcctttggagctgacactgaaatggagcaggctcca 522

                                                                       
Query: 301 ggactcccaccagcctacccaacccctgctggagagtgtagacagcaccaacccagcaac 360
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 521 ggactcccaccagcctacccaacccctgctggagagtgtagacagcaataacccagcaac 462

                                                                       
Query: 361 aataaggtttgatctgcacataaaaggaagcaagacaagaggtcctataggagacaacag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aataaggtttgatctgcacataaaaggaagcaagacaagaggtcctataggagacaacag 402

                                                                       
Query: 421 agcaaatgtcctggggaggaaaggagcaggatgctctgatgggacagaaatggccaggct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agcaaatgtcctggggaggaaaggagcaggatgctctgatgggacagaaatggccaggct 342

                                                                       
Query: 481 atgtggagaaaacagaatagagatgataaaatattaattgggactgttcatatttgtcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atgtggagaaaacagaatagagatgataaaatattaattgggactgttcatatttgtcta 282

                                                                       
Query: 541 tatggtttgcctcagaaaggattctcttaagtgctgggaggccaactcaaggctttgtca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tatggtttgcctcagaaaggattctcttaagtgctgggaggccaactcaaggctttgtca 222

                                
Query: 601 tgatgatagaggactttaagc 621
           |||||||||||||||||||||
Sbjct: 221 tgatgatagaggactttaagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)