Query= MSMg01no333_g02.b1 MSMg01no333_g02.b1 CHROMAT_FILE:
MSMg01no333_g02.b1 PHD_FILE: MSMg01no333_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:32 2005
(374 letters)
>mm_chr16_32670294_32671067
Length = 774
Score = 687 bits (355), Expect = 0.0
Identities = 367/371 (98%), Gaps = 2/371 (0%)
Strand = Plus / Plus
Query: 4 ggaattctccaggaata-tcggaaggcacaagcaatctaaagggcatgtacttggtgggg 62
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctccaggaatact-ggaaggcacaagcaatctaaagggcatgtacttggtgggg 262
Query: 63 gattaaaaggcttcctggaggacttgctgttaagtttaaaacatatggcaagcagccagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gattaaaaggcttcctggaggacttgctgttaagtttaaaacatatggcaagcagccagg 322
Query: 123 ccaggatggtcagtaggcttatctgtgtagagctggcggcaggcgggaatagattgcacc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaggatggtcagtaggcttatctgtgtagagctggcggcaggcgggaatagattgcacc 382
Query: 183 gtatcttgtaggcagtgactaactagtgacctccacgttggtgcttagcctgccttgggt 242
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 383 gtatcttgtaggcagtgactaactagtgacctccacgttgctgcttagcctgccttgggt 442
Query: 243 ccttgctgggcagatcctttgctgagatcgtggagtctcctagtgccagaggcagctaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ccttgctgggcagatcctttgctgagatcgtggagtctcctagtgccagaggcagctaaa 502
Query: 303 ggggtagcaaggagaggtcccaaagaagccgtccctttgacctttgtttttttttttttt 362
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggggtggcaaggagaggtcccaaagaagccgtccctttgacctttgtttttttttttttt 562
Query: 363 ttttttttttt 373
|||||||||||
Sbjct: 563 ttttttttttt 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_g02.g1 MSMg01no333_g02.g1 CHROMAT_FILE:
MSMg01no333_g02.g1 PHD_FILE: MSMg01no333_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:32 2005
(347 letters)
>mm_chr16_32827225_32827970
Length = 746
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1 tctcccacacttaactggaccccacacccctttgagtccgcattcccagaccattgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tctcccacacttaactggaccccacacccctttgagtccgcattcccagaccattgcctt 484
Query: 61 cctcccagcactgtgagctcactgggttttcttctccttttaagataagtcttttctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cctcccagcactgtgagctcactgggttttcttctccttttaagataagtcttttctctc 424
Query: 121 cctttgttctgtcctcatcccttgcatttgtacagacagacgatcccttactcactgccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cctttgttctgtcctcatcccttgcatttgtacagacagacgatcccttactcactgccg 364
Query: 181 tgggctgacccagtaaaccctaacctcagaaaccctcactctgcacgcgtgctcccatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgggctgacccagtaaaccctaacctcagaaaccctcactctgcacgcgtgctcccatcc 304
Query: 241 ttacgagagtcttctcgccctcaccctttaaacccccccccccccagtgtagctgccgtc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 303 ttacgagagtcttctcgccctcaccctttaaaccccccccccccc-gtgtagctgccgtc 245
Query: 301 tgctaaccccctctcctttaccttctgtaggaggaagattgccg 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgctaaccccctctcctttaccttctgtaggaggaagattgccg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 746
Length adjustment: 9
Effective length of query: 338
Effective length of database: 737
Effective search space: 249106
Effective search space used: 249106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
