Query= MSMg01no334_f05.b1 MSMg01no334_f05.b1 CHROMAT_FILE:
MSMg01no334_f05.b1 PHD_FILE: MSMg01no334_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:43 2005
(590 letters)
>mm_chr16_77377764_77378756
Length = 993
Score = 1056 bits (546), Expect = 0.0
Identities = 576/586 (98%), Gaps = 3/586 (0%)
Strand = Plus / Plus
Query: 5 ggaatt-atatctatgcaca-ttagttaggattacacctagacacttcttggataagata 62
|||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 ggaattcatatctatgcaaaattagttaggattacacctagacacttcttgaataagata 264
Query: 63 atttgattaatgtatttggttggcttttgtgactggtccaagaaagaattcccaccctgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttgattaatgtatttggttggcttttgtgactggtccaagaaagaattcccaccctgt 324
Query: 123 acaaccagaggctgatattctttcggaggaaagtaacaggcaaactgttcatcagagttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaaccagaggctgatattctttcggaggaaagtaacaggcaaactgttcatcagagttt 384
Query: 183 tgatcatcaatttggaaagcatagagcaacattatttcataaatattttcaagcattaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgatcatcaatttggaaagcatagagcaacattatttcataaatattttcaagcattaaa 444
Query: 243 gtaaacgttttatgatgtatatttttatgtgtcttcacctataatttacaaagtacataa 302
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaaatgttttatgatgtatatttttatgtgtcttcacctataatttacaaagtacataa 504
Query: 303 aattcataaacatgtatttggactgtatttaaagaaaatatatgcgtgatacgcaataga 362
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 aattcataaacatgtatttggactgtatttaaagaaaatatatgcatgatacgcaataga 564
Query: 363 tcattagaaatatttaaatgttcctctctcctaaagtatatagaaaacacatttcttggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcattagaaatatttaaatgttcctctctcctaaagtatatagaaaacacatttcttggt 624
Query: 423 tatgttagaaattggaacaggaggtattattttttatgatttttaaaaaagaaaacacat 482
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 625 tatgttagaaattggaacaggagatattattttttctgatttttaaaaaagaaaacacat 684
Query: 483 ttcttggttatgttagaaattggaacaggagatattattttttctgatttttaaaa-tta 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 685 ttcttggttatgttagaaattggaacaggagatattattttttctgatttttaaaaatta 744
Query: 542 ttcaatcagattttcaatttttttacagtccagtcatttccccctt 587
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 745 ttcaatcagattttcaatttttttacagtctagtcatttccccctt 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 993
Length adjustment: 10
Effective length of query: 580
Effective length of database: 983
Effective search space: 570140
Effective search space used: 570140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_f05.g1 MSMg01no334_f05.g1 CHROMAT_FILE:
MSMg01no334_f05.g1 PHD_FILE: MSMg01no334_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:43 2005
(246 letters)
>mm_chr16_77553715_77554360
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Minus
Query: 1 taggagactaagtccagactcctgagcaagccatagatggaagaaggtgtttctgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 taggagactaagtccagactcctgagcaagccatagatggaagaaggtgtttctgttgta 387
Query: 61 aacccagatactatttgcattcactgattgggagcctcagagcattaattacatgcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aacccagatactatttgcattcactgattgggagcctcagagcattaattacatgcctcc 327
Query: 121 tctctgtcgaattcatgcttctttttcaagatgcccacagaggaacttggtaagtttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tctctgtcgaattcatgcttctttttcaagatgcccacagaggaacttggtaagtttaaa 267
Query: 181 gtcatatcagatatgaaaaaagacattcaataaaatattttaatgggagattcagataac 240
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 266 gtcatatcagatataaaaaaagacattcaataaaatattttaatgggagatttagataac 207
Query: 241 ttagaa 246
||||||
Sbjct: 206 ttagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
