XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
ATGTTACTCAGTGATAATATTTTACTTCCCAATTTGTTAGGATTTTATTT
TAAAGAAGACAAAATTGAAGAGATAAGCAAGCAAGAAAGAGATTCCACAT
ATTTGGAGACAAGGATTTTAAGAGTGATATTAAGTATCTTTTAATTTAAA
AATTTAATAATTTTATTTAAAAAGTCTCTGTAAAATGTTGAAAACTGCTG
GGCGTGGTGGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGG
CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGAC
AGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAA
AAAAAAAAAAAAAAAACCATGTTGAAAACCTTCTATCTATAAGGCATTAT
CTCAGAGAAGGACACTCAATCCTTTGAGGTCATAATAACCAGCCTGCCAT
TATCTTTCATAAATATATAACATTTTGAACTTTTATTGCAATCATTATAA
TATGCTATTCAAATTCTTTTATGTAATTTGAAGCTGTCATCCTACCTCAT
AATTGTTATGAGGTTGCTAAAGTCATGCGCAAAGTAAGAAAGCTAATATT
TCTTTCTTTTGAAGTTACCAGATTCTTTTTCATATAATAGAATTTCATAA
ATTTGGAGGTGGTG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGTGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCC
AGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAG
TGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGC
TTAAACCATGAAAATCAAGAA

Query= MSMg01no335_f08.b1 MSMg01no335_f08.b1 CHROMAT_FILE:
MSMg01no335_f08.b1 PHD_FILE: MSMg01no335_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:03 2005
         (644 letters)



>mm_chr16_75222778_75223812
          Length = 1035

 Score =  795 bits (411), Expect = 0.0
 Identities = 448/465 (96%), Gaps = 10/465 (2%)
 Strand = Plus / Minus

                                                                        
Query: 180  ttaaaaagtctctgtaaaatgttgaaaactgctgggcgtggtggcacacacctttaatcc 239
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1035 ttaaaaagtctctgtaaaatgttgaaaactgctgggtgtggtggcacacacctttaatcc 976

                                                                        
Query: 240  cagcacttgggaggcagaggcaggcagatttctgagttcgaggccagcctggtctacaga 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  cagcacttgggaggcagaggcaggcagatttctgagttcgaggccagcctggtctacaga 916

                                                                        
Query: 300  gtgagttccaggacagccagggctacacagagaaaccctgtctcgaaaaaccaaaaaaaa 359
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 915  gtgagttccaggacagccagggctacacagagaaaccctgtctcaaaaaaccaaaaaaaa 856

                                                                        
Query: 360  aaaaaaaaaaaaaaaaaaaaccatgttgaaaaccttctatctataaggcattatctcaga 419
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 855  aaaaaaaaaaaaaaaaaaaa-catgttgaaaaccttctatctataaggcattatctcaaa 797

                                                                        
Query: 420  gaaggacactcaatcctttgaggtcataataaccagcctgccattatctttcataaatat 479
            || ||||||||||||||||||||||||||||||||    |||||||||||||||||||||
Sbjct: 796  gagggacactcaatcctttgaggtcataataacca----gccattatctttcataaatat 741

                                                                        
Query: 480  ataacattttgaacttttattgcaatcattataatatgctattcaaattcttttatgtaa 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 740  ataacattttgaacttttattgcaatcattataatatgctattcaaattctcttatgtaa 681

                                                                        
Query: 540  tttgaagctgtcatcctacctcataattgttatgaggttgctaaagtcatgcgcaaagta 599
            |||||||||||||||||||||||||||     ||||||||||||||||||||||||||||
Sbjct: 680  tttgaagctgtcatcctacctcataat-----tgaggttgctaaagtcatgcgcaaagta 626

                                                         
Query: 600  agaaagctaatatttctttcttttgaagttaccagattctttttc 644
            || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 625  agtaagctaaaatttctttcttttgaagttaccagattctttttc 581


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1035
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1025
Effective search space:   649850
Effective search space used:   649850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)