Query= MSMg01no336_b17.b1 MSMg01no336_b17.b1 CHROMAT_FILE:
MSMg01no336_b17.b1 PHD_FILE: MSMg01no336_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:05 2005
(462 letters)
>mm_chr16_78335207_78336068
Length = 862
Score = 785 bits (406), Expect = 0.0
Identities = 421/426 (98%)
Strand = Plus / Minus
Query: 5 gaattctcatcaagggctggagagatggctcagtgcttaagagcaccgactgctcttctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 gaattctcatcaagggctggagagatggctcagtgcttaagagcaccgactgctcttctg 761
Query: 65 aaagtcccgagttcagttcccagcaaccacatggtggctcacaaccatccgtaatgagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aaagtcccgagttcagttcccagcaaccacatggtggctcacaaccatccgtaatgagat 701
Query: 125 ctgacgccctcttctggtgcatctgaagacagctacagtgtacttagatatagtgataaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctgacgccctcttctggtgcatctgaagacagctacagtgtacttagatatagtgataaa 641
Query: 185 taaatctttaaaaaaaaaaagaagaagaagaattctcatcaagcacggacacagactata 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 taaatctttaaaaaaaaaaaaaagaagaagaattctcatcaagcacggacacagactata 581
Query: 245 aacctcaataactctgagtgcatcttaaaaaacaagcgttcagatctccaatctccagac 304
|||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||
Sbjct: 580 aacctcaataactctgagtgcatcttaaaaaataagcattcagatctccaatttccagac 521
Query: 305 ctaactaacagcgatgtccaagttgttaagctgtttaagtcacgtgttcttaatttttaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctaactaacagcgatgtccaagttgttaagctgtttaagtcacgtgttcttaatttttaa 461
Query: 365 aagtataaccctagttaaaatctaccagtttggaatatttaagaaaataagccgtgtgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 460 aagtataaccctagttaaaatctaccagtttggaatatttaagaaaataagccatgtgtg 401
Query: 425 tgtgtg 430
||||||
Sbjct: 400 tgtgtg 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_b17.g1 MSMg01no336_b17.g1 CHROMAT_FILE:
MSMg01no336_b17.g1 PHD_FILE: MSMg01no336_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:05 2005
(484 letters)
>mm_chr16_78169996_78170880
Length = 885
Score = 901 bits (466), Expect = 0.0
Identities = 481/486 (98%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 1 tcctgaaatagtctataatttgaggatgcactgtctttac-caatatgaggttgacctca 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 tcctgaaatagtctataatttgaggatgcactgtctttacgcaatatgaggttgacctca 260
Query: 60 ggttacctactctaagggacaaaggctagattattacagaagatggaaagccaaaataac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttacctactctaagggacaaaggctagattattacagaagatggaaagccaaaataac 320
Query: 120 cctggaaaagacaaagaaggtatactgctctcctgtcaagacagtagccagtttatgaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggaaaagacaaagaaggtatactgctctcctgtcaagacagtagccagtttatgaca 380
Query: 180 gctttactaatagatctaaagaaaggttaataactgcatattaggtatgaaggcataggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttactaatagatctaaagaaaggttaataactgcatattaggtatgaaggcataggt 440
Query: 240 tgccttattcaaaagaaaaaagtgtttgacatgtcagagttgattgaaatcaacacttga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgccttattcaaaagaaaaaagtgtttgacatgtcagagttgattgaaatcaacacttga 500
Query: 300 tttagtgggtagtgggtatggtcagtgccattcttcaagatacatcagtctcctgcacag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttagtgggtagtgggtatggtcagtgccattcttcaagatacatcagtctcctgcacag 560
Query: 360 gacacagatgagtcaaatgagcacattttaataatggcctcgccgggtgtggtggcacat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacacagatgagtcaaatgagcacattttaataatggcctcgccgggtgtggtggcacat 620
Query: 420 gcctttaatcccatcacttggcaggcaggggcaggtgaatctctgagtt-tgaggccagg 478
||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||||
Sbjct: 621 gcctttaatcccatcacttgggaggcaggggcaggtgaatttctgagttct-aggccagg 679
Query: 479 ctggtc 484
||||||
Sbjct: 680 ctggtc 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 885
Length adjustment: 10
Effective length of query: 474
Effective length of database: 875
Effective search space: 414750
Effective search space used: 414750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
