Query= MSMg01no337_h03.b1 MSMg01no337_h03.b1 CHROMAT_FILE:
MSMg01no337_h03.b1 PHD_FILE: MSMg01no337_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:50 2005
(547 letters)
>mm_chr16_6138780_6139726
Length = 947
Score = 888 bits (459), Expect = 0.0
Identities = 462/463 (99%)
Strand = Plus / Minus
Query: 4 ggaattcaaagcagttacaaacaaggagaaatgaatgtggtcctgctttgctgctctcag 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggaattcaaagcagttagaaacaaggagaaatgaatgtggtcctgctttgctgctctcag 404
Query: 64 ttaactttctcctggcttgcatagttcaggaactgctgctaaggaagtggtgccttacat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttaactttctcctggcttgcatagttcaggaactgctgctaaggaagtggtgccttacat 344
Query: 124 agtgtactgagttctcctctatcgattaccaaggcaaccaccctcaggccaacctgatgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agtgtactgagttctcctctatcgattaccaaggcaaccaccctcaggccaacctgatgg 284
Query: 184 aggctctcttctcaggtgacagtaggttgtggcaatttaacaattaattataaaatgtac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aggctctcttctcaggtgacagtaggttgtggcaatttaacaattaattataaaatgtac 224
Query: 244 acttattgtatctgtgtgcttgtatgtgtatctatttacacttgcataatgtgtgtgtag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 acttattgtatctgtgtgcttgtatgtgtatctatttacacttgcataatgtgtgtgtag 164
Query: 304 aagtcaaataatcacttgtgttaataggttttcttcttctaatctgtgggttctaggatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aagtcaaataatcacttgtgttaataggttttcttcttctaatctgtgggttctaggatt 104
Query: 364 tgaagtcaaatcatcaggcttgagacaggaagtgcctgttcatgctgagccatctcactg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tgaagtcaaatcatcaggcttgagacaggaagtgcctgttcatgctgagccatctcactg 44
Query: 424 acccacaagttggcaatggaagtctactaacaacctgtctaca 466
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 acccacaagttggcaatggaagtctactaacaacctgtctaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_h03.g1 MSMg01no337_h03.g1 CHROMAT_FILE:
MSMg01no337_h03.g1 PHD_FILE: MSMg01no337_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:50 2005
(441 letters)
>mm_chr16_5957742_5958582
Length = 841
Score = 853 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 1 catggagcttatactgccccctcctcccttctccctctttctttccttcttaaaacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catggagcttatactgccccctcctcccttctccctctttctttccttcttaaaacaaat 260
Query: 61 actaaggcatcattagacccataacatctgttaattactctaggaaattaactccaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actaaggcatcattagacccataacatctgttaattactctaggaaattaactccaacaa 320
Query: 121 tctattgacctgtttttatttttttttaaatagggcctcatattgcttacattggtctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctattgacctgtttttatttttttttaaatagggcctcatattgcttacattggtctca 380
Query: 181 aacgcaactgtgtatataacaatgatcttgaacccttgatacttctatctctacctccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacgcaactgtgtatataacaatgatcttgaacccttgatacttctatctctacctccca 440
Query: 241 agagctgagattataggtgtatgccactaagcctagcttatgtggtgttaggggtcagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagctgagattataggtgtatgccactaagcctagcttatgtggtgttaggggtcagcc 500
Query: 301 cagagctttaagcttgctagatatgcactctaccaactgacacacatctccaacccctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagagctttaagcttgctagatatgcactctaccaactgacacacatctccaacccctac 560
Query: 361 gacaacagtgtataaacctacttctcttttgcttgattttcgagacaggttctcatattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacaacagtgtataaacctacttctcttttgcttgattttcgagacaggttctcatattg 620
Query: 421 ccaaggctgatctcaaactta 441
|||||||||||||||||||||
Sbjct: 621 ccaaggctgatctcaaactta 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
