Query= MSMg01no338_d15.b1 MSMg01no338_d15.b1 CHROMAT_FILE:
MSMg01no338_d15.b1 PHD_FILE: MSMg01no338_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:49 2005
(616 letters)
>mm_chr16_37130964_37131979
Length = 1016
Score = 1152 bits (596), Expect = 0.0
Identities = 611/616 (99%)
Strand = Plus / Minus
Query: 1 gtttatagcacagccatatccaccaattatttgttgactatggccgcctttacactacaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 816 gtttatagcacagccatatccaccaattatttgttgactatggccacctttacactacaa 757
Query: 61 aacagaaccgaacacttgcaaaggagatgctataggctccagagcttacaatgtttactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 756 aacagaaccgaacacttgcaaaggagatgctataggctccagagcttacaacgtttactg 697
Query: 121 tctgatgctacaagttattctttcaggaaaatgtgtggtaaatagaaagagaagtaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 696 tctgatgctacaagttattctttcaggaaaatgtgtggtaaatagaaagagaagtagtaa 637
Query: 181 ggccctgaagagtgaaaccagactttcatgatgctttatttcattatttctaattgagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggccctgaagagtgaaaccagactttcatgatgctttatttcattatttctaattgagaa 577
Query: 241 gacatgatcagatctataaagaattagtgaaggagaaactttgggggaaaaaagcaatca 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gacatgagcagatctataaagaattagtgaaggagaaactttgggggaaaaaagcaatca 517
Query: 301 tagcaggcttattctcaaatatttctgattcgttctccatcagattatccctttctcaga 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tagcaggcttattcttaaatatttctgattcgttctccatcagattatccctttctcaga 457
Query: 361 ctattttgaaagattttccgtgaagatcagtccatctgtctgtaaatgattgcgcctcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctattttgaaagattttccgtgaagatcagtccatctgtctgtaaatgattgcgcctcta 397
Query: 421 gacatgcttcgatggtggggactttatttatgaggggactcggtgatgcacttgcttctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gacatgcttcgatggtggggactttatttatgaggggactcggtgatgcacttgcttctc 337
Query: 481 tcagatcatttgtcattaaaaatattatcaaaccagtattatagttttcatatttcagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcagatcatttgtcattaaaaatattatcaaaccagtattatagttttcatatttcagat 277
Query: 541 cattttctaaatttttatttttacttttaattgtgtgtagatgtgggttgtacacatgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cattttctaaatttttatttttacttttaattgtgtgtagatgtgggttgtacacatgtg 217
Query: 601 ttcaggtgctcttgga 616
||||||||||||||||
Sbjct: 216 ttcaggtgctcttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_d15.g1 MSMg01no338_d15.g1 CHROMAT_FILE:
MSMg01no338_d15.g1 PHD_FILE: MSMg01no338_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:49 2005
(567 letters)
>mm_chr16_36980289_36981255
Length = 967
Score = 955 bits (494), Expect = 0.0
Identities = 547/572 (95%), Gaps = 14/572 (2%)
Strand = Plus / Plus
Query: 1 tcttagtagcaatgtattgaacttagtgaagttctttttttttttttttttaatctttag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 210 tcttagtagcaatgtattgaacttagtgaag---------tttttttttttaatctttag 260
Query: 61 tttgcaataacccctcacatctttaaggaatttttacaatggctctctccctttgctttt 120
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 261 tttgcaataacccctcacatctttaaggaatttttacaatggcgctctctctttgctttt 320
Query: 121 gttatctgtctactgtctacccattcaacaaacatttgttgactgtactctatgtgtcag 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 gttatctgtctactgtctacccatccaacaaacatttgttgactgtactctatgtgtcag 380
Query: 181 taatacccatgagtcttacagggtgctttcaaaccaagacataagacactttcattagga 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatactcatgagtcttacagggtgctttcaaaccaagacataagacactttcattagga 440
Query: 241 tcagaggtgacactcgtatacctataaatctgcactgtcctatatt---gtcatcagctt 297
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 441 tcagaggtgacactcgtatacctataaatctgcactgtcctatattgtagtcatcagcct 500
Query: 298 gtggctgttt--gtttggttaaaatgaaataagctgagtaaatcctccttcgtgccagcc 355
|||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 gtggctgtttcagtttggtcaaaatgaaataagatgagtaaatcctccttcgtgccagcc 560
Query: 356 atgctccaagtgttcagtagccatatctgcaggtagctactctgttggatgacacagaag 415
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgctccaagtgttcagtagccacatctgcaggtagctactctgttggatgacacagaag 620
Query: 416 agaacattccctttttcacagatggtcctattgcactgtgatattatagaatctgactga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaacattccctttttcacagatggtcctattgcactgtgatattatagaatctgactga 680
Query: 476 aacccttgttcctgtgtgggagaaatactggaattataccctcaagacatgtcctggttt 535
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 681 aacccttgttcctgtgtgggagaaatactggaattataccctcaatacgtgtcctggttt 740
Query: 536 ttgcttgtttcatcaacttgacacaagctaga 567
||| ||||||||||||||||||||||||||||
Sbjct: 741 ttgtttgtttcatcaacttgacacaagctaga 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
