Query= MSMg01no338_e09.b1 MSMg01no338_e09.b1 CHROMAT_FILE:
MSMg01no338_e09.b1 PHD_FILE: MSMg01no338_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:52 2005
(598 letters)
>mm_chr16_75224814_75225810
Length = 997
Score = 946 bits (489), Expect = 0.0
Identities = 573/607 (94%), Gaps = 17/607 (2%)
Strand = Plus / Minus
Query: 4 ggaattcattacattgttacattacaaaatcagaacactaatcttttaaaaatcattgca 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggaattcattacattgttagattacaaaatcagaacactaatcttttaaaaatcattgca 552
Query: 64 tgttttgtgttattcaagtgtaaaattctgtatagcaatacggcaaagctcaagaacaga 123
|||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||
Sbjct: 551 tgttttgtgttattcaagtgtaaaattctgtatagcaatatggcaaag-ttaagaacaga 493
Query: 124 aagaggagaagcaattccatttcttaagtgctctcagaaaataaacccattatttcttaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aagaggagaagcaattccatttcttaagtgctctcagaaaataaacccattatttcttaa 433
Query: 184 atataagtatcgtattttagaagatgaaaatgagtgtgtagagaaagttaaagtgtctcc 243
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atataggtatcatattttagaagatgaaaatgagtgtgtagagaaagttaaagtgtctcc 373
Query: 244 tttgcattcaaatgattaaccacacaatatcatttgtaaattcatggtatatatacacat 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 372 tttgcattcaaatgattaaccacacaatatcatttgtaaattcatggtatatgtacacat 313
Query: 304 ataataggtgtgtgcatgttcatgtgctagtggtatgcaagtatattcagatttctgtgg 363
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 312 ataataggtgtgtgcatgttcatgtgctagtggtatgcaagtatgttcagatttctgtgg 253
Query: 364 acaccagggctcaacttctagtgccatttctaaggatggttttcatttttctttctcttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 acaccagggctcaacttctagtgccatttctaaggatggttttcatttttctttctcttt 193
Query: 424 ttatgcctttctttctttctctctctctctctctctctctctctctctctctctctctct 483
|||||||||||| ||| ||||||||||||||||||||| ||| || || ||||| | |||
Sbjct: 192 ttatgcctttctctctctctctctctctctctctctctttctttc-ctttctcttt-tct 135
Query: 484 ---ct---ct---ctttcctttctcttttcttttcttttcttt-tctttcctt----tct 529
|| || ||||||||||||||||||| ||||| |||| ||||| ||| |||
Sbjct: 134 tttcttttcttttctttcctttctcttttcttctctttcctttctcttttcttctcttct 75
Query: 530 cttttcttttcttttcttttcttttcttttcttttctttcttttcttttcttttcttttc 589
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 74 cttttcttttcttttcttttcttttcttttcttttctttcttttctcttcttttcttttc 15
Query: 590 tttttgg 596
|||||||
Sbjct: 14 tttttgg 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 91
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 997
Length adjustment: 10
Effective length of query: 588
Effective length of database: 987
Effective search space: 580356
Effective search space used: 580356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_e09.g1 MSMg01no338_e09.g1 CHROMAT_FILE:
MSMg01no338_e09.g1 PHD_FILE: MSMg01no338_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:52 2005
(591 letters)
>mm_chr16_75079962_75080952
Length = 991
Score = 1023 bits (529), Expect = 0.0
Identities = 567/595 (95%), Gaps = 26/595 (4%)
Strand = Plus / Plus
Query: 1 tttggacatcagtaaatacaggaagatgtctgtcctttccacctatgtaccttctccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggacatcagtaaatacaggaagatgtctgtcctttccacctatgtaccttctccttt 260
Query: 61 tttcattactcctcttttggccaaggtaagcaagtttaaaaaaatccctttcattttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcattactcctcttttggccaaggtaagcaagtttaaaaaaatccctttcattttctt 320
Query: 121 taaaacactagccatactatgcctttttctatatgtggctattcctgttcccttatccag 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 taaaacactagccatactatgcctttttctatatgtggctattcctgtttccttatccag 380
Query: 181 gtaatgaactatattgcaatattttatttaaaccacttgccaaaattttaagatttcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaatgaactatattgcaatattttatttaaaccacttgccaaaattttaagatttcatc 440
Query: 241 attatctgtgagttctttcttataattttccaaaagatggtgactatgaaatatatatat 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attacctgtgagttctttcttataattttccaaaagatggtgactatgaaatatatatat 500
Query: 301 atata----attcaatttacataataattttaattatataatgtatatatgatatacata 356
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatatagaattcaatttacataataattttaattatataatgtatatatgatata---- 556
Query: 357 tatatgtatgtgtatatatatatacatatgtatatatatatatatatatatatcttaaga 416
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 557 ------------tatatatatata------tatatatatatatatatatatatcttaaga 598
Query: 417 atatgtccacagtgttaatcagtctaaactaattgacattcacatattacctgcttaaat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 atatgtccacagtgttaatcagtctaaactaattgacattcacatattacctgcttaaat 658
Query: 477 taaattatagtaatgacaactggtgtcaatgatattaaacaactcaattttaaactaaaa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 taaattatagtaatgacaactggtgtcaatgatattaaacaactcaattttaaactaaaa 718
Query: 537 tgtttatatttgtgcagactaaattataacatggtgaactttaaagatcacagtt 591
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tgtttatatttgtgcagactaaattataacatggtgaactttaaagatcacagtt 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
