Query= MSMg01no338_j14.b1 MSMg01no338_j14.b1 CHROMAT_FILE:
MSMg01no338_j14.b1 PHD_FILE: MSMg01no338_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:16 2005
(656 letters)
>mm_chr16_24747463_24748519
Length = 1057
Score = 1210 bits (626), Expect = 0.0
Identities = 647/654 (98%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 4 ggaattctaaagtctcc-aatgtatttctttgctctgtggtagttgtgctctctgaagga 62
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaaagtcacataatgtatttctttgctctgtggtagttgtgctctctgaagga 263
Query: 63 aatatgtggcgatatgattggctttccctgtacatggctattttggtttttttacatatt 122
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 264 aatatgtggtgatatgattggctttccctgtacctggctattttggtttttttacatatt 323
Query: 123 tatgataattttataataagaaaattagggaagaaaaaaacagaatgtctggatttccac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatgataattttataataagaaaattagggaagaaaaaaacagaatgtctggatttccac 383
Query: 183 ttgccactgtcatgacccaaagattttgttttgttgtctttcttggtacttgattttagt 242
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 ttgccactgtcatgacccaaagattttgttttgttgtctttcttggtactggattttagt 443
Query: 243 catggtgtttgtacaagtttatattcttttgctttcttatgatgttatagcatataggaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catggtgtttgtacaagtttatattcttttgctttcttatgatgttatagcatataggaa 503
Query: 303 ataaacattttatagccagtgtagtttgaagtttgggaaagcaaattttgaaaatatagt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataaacattttatagccagtgtagtttgaagtttgggaaagcaaattttgaaaatatagt 563
Query: 363 caaatgaggaatttttaaaaaatattctctttcaaaggatcttaggtaccagaatttatc 422
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caaatgaggaattttttaaaaatattctctttcaaaggatcttaggtaccagaatttatc 623
Query: 423 tgtgataaaaggtgtccctcagaaactttaaggtatcaagaatctttcagatttaacaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgataaaaggtgtccctcagaaactttaaggtatcaagaatctttcagatttaacaaa 683
Query: 483 tcatttatttttataaagagaaaattgaaaccctaaaattaccatgagtgcatttgtcag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcatttatttttataaagagaaaattgaaaccctaaaattaccatgagtgcatttgtcag 743
Query: 543 gctctgtattttcttagattgttccaagttaaaagtgtgtccagagacattatgtctgga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gctctgtattttcttagattgttccaagttaaaagtgtgtccagagacattatgtctgga 803
Query: 603 tttgctattgttcattattttaaaaagggatagaaaggagatgagccaattctt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tttgctattgttcattattttaaaaagggatagaaaggagatgagccaattctt 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1057
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1047
Effective search space: 676362
Effective search space used: 676362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_j14.g1 MSMg01no338_j14.g1 CHROMAT_FILE:
MSMg01no338_j14.g1 PHD_FILE: MSMg01no338_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:16 2005
(126 letters)
>mm_chr16_24927096_24927621
Length = 526
Score = 221 bits (114), Expect = 2e-62
Identities = 123/126 (97%)
Strand = Plus / Minus
Query: 1 tctggtcacacgaggaatgctatctgcccactgcactgcaggccagagggaaacagaaac 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tctggtcacatgaggaatgctatctgcccactgcactgcaggccagagggaaacagaaac 267
Query: 61 tgatgcccttgcttcccgtctccatcatcacccatatcctcatttatataacggcatgcg 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 266 tgatgcccctgcttcccgtctccatcatcacccatatcctcatttatataacggcatgtg 207
Query: 121 aatttt 126
||||||
Sbjct: 206 aatttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
