XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCAGACAACTAACCCAAGAATATGGACTTAAGTGGGAAAAAGAAGAATTC
AGTCATGTCCTAAGAATGAAAATTTCCATGAAGAAAATCTTGTAATGATT
CACATTTTATAATGCCTACAGAATGCATTCAAGCACTATTAGAAAACACA
TGATTGTATTAGCAGACAAATTAATGATTTAGACATTTGCTTACAATATA
ACATATGTAAACTTTTACAAAGCTATATTAACATATATAAACATTAACAT
AATCATGCTTACAGTTCTAAAGAGGCAAATGTGTTACAAAATAAATTGTA
GTTATTGCAAATGTATGCTTTGCTAAGTTTTGGTATAAAATAAATCTGTA
AATCTCTGAAGAAATAAAGAGAACAGCATATCTGCTATGACAAAGAATGT
CTTGGTGTGTCCCTGTAGCCCTCCTTGGGTTACTTCTCCACATATCATAC
TGAAGCCCTGTTCAAAATGCAATGATATACATGTCCATACATCTTCTTGA
GTGGCCTTTGATAATTATGTAATTCAAGAATATTGTATCATCTAGGGTCT
CGATTTTTTTAATGTATTATAACTTCCATATGATTACTTTAGTCTACAGA
ATATTTAGCTAGATCACTTTTCATGTGCCACTCATTGGGATCTTGACAGT
TATCTCCCGAATTTTTTTTTCAAATTAAGAAACCTTCTCCACAAGATTAC
ATAAAAATAAGTTN

NCCATGCTANNGNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCCCAGACCTGCTTACATATTCAGACCT
TTTACTTTCTATTTAAATCTAAACCTCTTGTCAGGATCTCAAAGTGGGAT
TTAGAGGGTTAGTGGAACTCTTTCCACTGTGACCACATTGGGGACATTTC
TTTCCNAATTAGAGGCCGGGGGGTCGGCGGGGGGGGCGCGGCTGGGGGCA
GCCGGATCTGGGCTCAGCTCCCCGTGAAGAAGNNCAAAANACCCAAAGTC
TGGGACAACAAAAAACCCCCTAAGTTTTCTAAAATGGGGGCGGAAAAAAA
AATCTGGNAACAAAAAATCCTTGAAAAANNNAAAAAAGNAAAAAAGGTTT
GTAGAGGGGGGTCTAATAAGNAAGNAGAAGGGGGGGGTCGGGGGGGGGGT
TTATTTTATAAAANNNNNNNNNNTTTTTTTTTTGGGGAGAATCATCCCCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGNNGGNGNNGGGGGGGGGGGGGGGGG

Query= MSMg01no338_j19.b1 MSMg01no338_j19.b1 CHROMAT_FILE:
MSMg01no338_j19.b1 PHD_FILE: MSMg01no338_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:17 2005
         (603 letters)



>mm_chr16_63368109_63369112
          Length = 1004

 Score = 1129 bits (584), Expect = 0.0
 Identities = 596/600 (99%), Gaps = 1/600 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccagacaactaacccaagaatatggacttaagtgggaaaaagaagaattcagtca 64
           |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaattccagacaacgaagccaagaatatggacttaagtgggaaaaagaagaattcagtca 745

                                                                       
Query: 65  tgtcctaagaatgaaaatttccatgaagaaaatcttgtaatgattcacattttataatgc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgtcctaagaatgaaaatttccatgaagaaaatcttgtaatgattcacattttataatgc 685

                                                                       
Query: 125 ctacagaatgcattcaagcactattagaaaacacatgattgtattagcaga-caaattaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 684 ctacagaatgcattcaagcactattagaaaacacatgattgtattagcagaccaaattaa 625

                                                                       
Query: 184 tgatttagacatttgcttacaatataacatatgtaaacttttacaaagctatattaacat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgatttagacatttgcttacaatataacatatgtaaacttttacaaagctatattaacat 565

                                                                       
Query: 244 atataaacattaacataatcatgcttacagttctaaagaggcaaatgtgttacaaaataa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atataaacattaacataatcatgcttacagttctaaagaggcaaatgtgttacaaaataa 505

                                                                       
Query: 304 attgtagttattgcaaatgtatgctttgctaagttttggtataaaataaatctgtaaatc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attgtagttattgcaaatgtatgctttgctaagttttggtataaaataaatctgtaaatc 445

                                                                       
Query: 364 tctgaagaaataaagagaacagcatatctgctatgacaaagaatgtcttggtgtgtccct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctgaagaaataaagagaacagcatatctgctatgacaaagaatgtcttggtgtgtccct 385

                                                                       
Query: 424 gtagccctccttgggttacttctccacatatcatactgaagccctgttcaaaatgcaatg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 384 gtagccctccttgggttacttctccacatatcatactgaagccctgttcaaaatgtaatg 325

                                                                       
Query: 484 atatacatgtccatacatcttcttgagtggcctttgataattatgtaattcaagaatatt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atatacatgtccatacatcttcttgagtggcctttgataattatgtaattcaagaatatt 265

                                                                       
Query: 544 gtatcatctagggtctcgatttttttaatgtattataacttccatatgattactttagtc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtatcatctagggtctcgatttttttaatgtattataacttccatatgattactttagtc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space:   589442
Effective search space used:   589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)