Query= MSMg01no339_g03.b1 MSMg01no339_g03.b1 CHROMAT_FILE:
MSMg01no339_g03.b1 PHD_FILE: MSMg01no339_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:12 2005
(595 letters)
>mm_chr16_64860783_64861777
Length = 995
Score = 1007 bits (521), Expect = 0.0
Identities = 566/583 (97%), Gaps = 4/583 (0%)
Strand = Plus / Plus
Query: 17 gaattcttaactgactgatggaggtcccagtccattgtgagtggttacatctcctggatt 76
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 217 gaattcttaactgactgatggaggtcccagtccattgtgagtggttacatctcctggact 276
Query: 77 gtgggtttcagttctataagaaagcagactgtctgcctggtccacctggagcagcagagg 136
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtgggcttcagttctataagaaagcagactgtctgcctggtccacctggagcagcagagg 336
Query: 137 aaagctgcacactatcctttcgtctccatcatctggcccacagccatgtctgccttccca 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aaagctgcacactatcctttcgtctccatcatctggcccacagccatgtctgccttccca 396
Query: 197 aaaaggcctgcataccccaaaaacatccaggtccatagctctgtccggcttcctcgggag 256
|||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 397 aaaaggcctgcaggccccaaaaacatccaggtccatagctctgtctgccttcctcgggag 456
Query: 257 tcctgtcagcattaggaacatccggtcaacaacagggacaaccagacggcttaaagccag 316
||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||
Sbjct: 457 tcctgtcagcattaggaacattcagtcaacaacagggacaaccagatggcttaaagccag 516
Query: 317 catgagaacataatca----gagccaggacaataaggggccaccagagcacagctatcct 372
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 517 catgagaacataatcaatcagagccaggacaataagggaccaccagagcacagctatcct 576
Query: 373 actatagcaagcaagcactggacatccctggatagtctaacacagctgaagcacaagaag 432
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 577 actatagcaagcaagcactggacatccctggatactctaacacagctgaagcacaagaag 636
Query: 433 gtgaccttaaattgaggatgatacaggcctttaaagaccattgaagaaattataaatccc 492
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 637 gtgaccttaaattgaggatgatacaggcctttaaagaccattgaagaaactataaatccc 696
Query: 493 ttaaagaaatacaggaaagtaaaatcaaacagttgaaggaaatgaataaagctgtttaag 552
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 697 ttaaagaaatacaggaaagtaaaatcaaacagttgacggaaatgaataaagctgtttaag 756
Query: 553 aactgaaaaatggaaattgaagtaataaagagaacaatgaagg 595
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aactgaaaaatggaaattgaagtaataaagagaacaatgaagg 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_g03.g1 MSMg01no339_g03.g1 CHROMAT_FILE:
MSMg01no339_g03.g1 PHD_FILE: MSMg01no339_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:12 2005
(554 letters)
>mm_chr16_65063597_65064550
Length = 954
Score = 772 bits (399), Expect = 0.0
Identities = 402/403 (99%)
Strand = Plus / Minus
Query: 152 agtagaaaaatctttaactgttttcctcatgaagcaattttacaagtgctgtccctgagc 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 agtagaaaaatctttaactgttttcctcatgaagcaattttacaagtgctgtccctgagc 895
Query: 212 ctcccatatcaaaataacctaatctacttgttccaaaaacacagaattcttagccctgct 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 ctcccatatcaaaataacctaatctacttgttccaaaaacacagaattcttagccctgct 835
Query: 272 cccagccttctgagttacagcctccaagctcgaaccaggaaaacagtatttcagcaagca 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 cccagccttctgagttacagcctccaagctcgaaccaggaaaacagtatttcagcaagca 775
Query: 332 actcaagtgattcctatgtattataaggcagttttgaatagattcttctttgagttttta 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 actcaagtgattcctatgtattataaggcagttttgaatagattcttctttgagttttta 715
Query: 392 tataactgatactcggaccctgatccttaacgatatgcaccaaagaaagcatatatttcc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tataactgatactcggaccctgatccttaacgatatgcaccaaagaaagcatatatttcc 655
Query: 452 atttcaatgaataagtgtaaaatcgagtttacatgtttaatttttattattgataaaggg 511
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 654 atttcaatgaataagtgtaaaatcgagtttatatgtttaatttttattattgataaaggg 595
Query: 512 aagctattttattctaactttacaaattgactgcttatttgag 554
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aagctattttattctaactttacaaattgactgcttatttgag 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
