Query= MSMg01no339_j07.b1 MSMg01no339_j07.b1 CHROMAT_FILE:
MSMg01no339_j07.b1 PHD_FILE: MSMg01no339_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:27 2005
(579 letters)
>mm_chr16_59558670_59559648
Length = 979
Score = 1096 bits (567), Expect = 0.0
Identities = 576/579 (99%)
Strand = Plus / Plus
Query: 1 cagaagtaggatttctgttcagttcagattttagttcatgtgctgtttcactttctgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaagtaggatttctgttcagttcagattttagttcatgtgctgtttcactttctgtgc 260
Query: 61 atgcgacaaccaccgagtcactgacacccttcacagacccagggtcctcttgagtttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcgacaaccaccgagtcactgacacccttcacagacccagggtcctcttgagtttttc 320
Query: 121 ccatctcgtgaggagttttgacatgtagttccaaaccaagccttttggtttctgtttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatctcgtgaggagttttgacatgtagttccaaaccaagccttttggtttctgtttcac 380
Query: 181 acggtgactctggtggctccgtttctttgggtaaggactcaattctgacttcgggagttc 240
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acggtggctccggtggctccgtttctttgggtaaggactcaattctgacttcgggagttc 440
Query: 241 ttacatgacttaaagttgtgggctccctgcctgaggcacattctgtttctttcaagattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttacatgacttaaagttgtgggctccctgcctgaggcacattctgtttctttcaagattt 500
Query: 301 ctgaaaccatatttttctgcgagtctcgggcaggtaacttctttccttcatttacaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgaaaccatatttttctgcgagtctcgggcaggtaacttctttccttcatttacaagtt 560
Query: 361 ctgagtctgtcacagcatgtccctggagagccataatgcaggcgtgattgacagtccgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgagtctgtcacagcatgtccctggagagccataatgcaggcgtgattgacagtccgcc 620
Query: 421 ttgatgggttatctacagctggcttgtcaccacacttatgctctggcaaccgtgcatctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgatgggttatctacagctggcttgtcaccacacttatgctctggcaaccgtgcatctt 680
Query: 481 catgcctaattgatttatgtggacttgacaaatttgtactttccattttggtagtgtcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgcctaattgatttatgtggacttgacaaatttgtactttccattttggtagtgtcac 740
Query: 541 tcccatcagatttactacgggagaagtcaggaacagaag 579
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 741 tcccatcagatttactgcgggagaagtcaggaacagaag 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_j07.g1 MSMg01no339_j07.g1 CHROMAT_FILE:
MSMg01no339_j07.g1 PHD_FILE: MSMg01no339_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:27 2005
(556 letters)
>mm_chr16_59729402_59730360
Length = 959
Score = 1050 bits (543), Expect = 0.0
Identities = 554/559 (99%), Gaps = 3/559 (0%)
Strand = Plus / Minus
Query: 1 tcactaacaagataaatataagtaggtaaagaaaaaactgattt---aaaaaaaaacatg 57
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 695 tcactaacaagataaatataagtaggtaaagaaaaaactgatttaaaaaaaaaaaacgtg 636
Query: 58 aggtttacaggtcagaaaaaatcatggaaagtaaaattcacatcagaagatatataaatg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aggtttacaggtcagaaaaaatcatggaaagtaaaattcacatcagaagatatataaatg 576
Query: 118 tcactataaatgaaagctatgcatttcatgttaataattaggaaaaatgcaaggtaggac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcactataaatgaaagctatgcatttcatgttaataattaggaaaaatgcaaggtaggac 516
Query: 178 aagattttgttttcaactattgaagtaagacaaataaggaagatttataatgtaagaacc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aagattttgttttcaactattgaagtaagacaaataaggaagatttataatgtaagaacc 456
Query: 238 tggcaggaataattagaaataaaaatgtttacacaatgttggtagaagcagaaattgatg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tggcaggaataattagaaataaaaatgtttacacaatgttggtagaagcagaaattgatg 396
Query: 298 aacctgttttacagagcacttggcagtatctcagattttcaattttaactgttgtctgca 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aacctgttttacagagcacttggcagtatctcagattttcaattttaactgttgtctgca 336
Query: 358 gaaatattttataggaaaacagtgacttagatacaatcatcagatcattgtttagcagag 417
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 335 gaaatattttataggaaaacagtgacttagatacaatcatcggatcattgtttagcagag 276
Query: 418 agaaaacttggagaaaaattgaattcctcgtactctggggttttaaattaattattaaca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agaaaacttggagaaaaattgaattcctcgtactctggggttttaaattaattattaaca 216
Query: 478 tttacattacaggactgaaggctttgatttttcaaaacctactttaattggggttcttaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tttacattacaggactgaaggctttgatttttcaaaacctactttaattggggttcttaa 156
Query: 538 acgcctcaactaatcagtg 556
|||||||||||||||||||
Sbjct: 155 acgcctcaactaatcagtg 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 959
Length adjustment: 10
Effective length of query: 546
Effective length of database: 949
Effective search space: 518154
Effective search space used: 518154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
