XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ATTCTTTAATAGTAATTACTATTCTAATGGCATCACTGTTAATCATAAAG
TTTTTGAATAGTCATAGTTCCCAAATTGAATGAAGTCTGCTGTCCCAATT
TATACTTTAGAATATCAACATTTATAATGCCGAAGGATGTGAAGAACTGT
AATCCTAAACGCATGCGGGGTAAGTCAAGGATGATGGGGAGATGTAGACA
CTTAAGTAGACATCTTTCTAACTCTACCTCGAGGTCTTTAAAGAGAAGCC
TATAGGATAGTTTGTCTCATATTTAAACCGGGTCAAATAAATCACAAAAT
GAAGTGCTATGATTTTCTCTTAAAATCAACATTTAGTTTTTTACTTCATG
TGTTCAAAACAATTGCAGATGCTTAAAAATTAGACCCACAAAAATGAAAG
TAAAATCCCCAGCAGTCCCCCCACCTTTCAAGTATGTCTCTTAAGGTGNT
CATATACATCCGCTCGGTTTGAGAATGGCCTCATCTCCCACATCATATAC
TTTCCCTATCCCTCTGACATTTGTGAATGGATACATTAAAAGAGGACTAC
AAACCCCCATGACCAAGAAAAACATTCCGTGACTCCTTAAAAATGGCCAT
GGTTGACTTTTGATTTATTACAGAAATGGAATTGTTCCCGCCTAAAAAAC
TGGACCCCTCCAAAAAATTGACCCAAATTCCGGGTTCCTTAAAGGCCTTC
ACCTTGGGGGGCCCCGAAAAAAAGAAACCACCCTCTTTATAAAA

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAATATGACACAGATACCATAAAATCCAGCT
CTACTGTTCTTTGATATATCTCCAAAGGATCCTACTACAGTTATACAATT
ATACTTGTTTATCCATGTTCACTGTTGTTCAATTCACAACAGAAAGGCAA
TGGAAGCAGCCTAGATTTCCATCAAGTGATCAATGTATGAAACTGAGCTA
CAGATAGTTAATGAGATTGTATTCAGCTGCAGAAAAAAACAAAAATTGCA
TTTTGATGAGAACTAGAAAAAAAAATATATATATATATATATATATATAT
TGAATGAGGTAACCAATATATATTGAATGAGGTAACCAACCAAAAACAAA
AAACAAACAAAACAAAAAACAAAACAACAACAACAAAAAAAAACCCAATA
TCTTATGTGCATGCTGCCTGTGATGGTTTGTATATTTTTGGGCCAGGGAG
GTGTGGCCTTGTTGGAATAAGTGTGACCTGCTTGTAGCACGTGGGTTCCT
GTCCTTCTGGCCTTAATAATCCTCCCTTTCTCTTTGGGAATCATTTCTCC
CCCTAACAATCCTTTTTATGTAACAACATAATTTCCTCCCCCCTTCCCTC
CTCTTAAACTCTGCTTTCCCTTTTTTTTTTTTTTTTTTTTTTGCCCCTCT
CCTTTTTCTTTTCTCCCCCCCCCAATTTTTTTTCCTTTTCCACTCCCTTC
CTACCGCTTTTTCTCTCCTTTACCTTTCCC

Query= MSMg01no341_h23.b1 MSMg01no341_h23.b1 CHROMAT_FILE:
MSMg01no341_h23.b1 PHD_FILE: MSMg01no341_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:46 2005
         (434 letters)



>mm_chr16_27364956_27365788
          Length = 833

 Score =  741 bits (383), Expect = 0.0
 Identities = 416/427 (97%), Gaps = 1/427 (0%)
 Strand = Plus / Minus

                                                                       
Query: 8   ttcattctttaatagtaattactattctaatggcatcactgttaatcataaagtttttga 67
           |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 633 ttcattctttaatattaattactattctaatggcatcattgttaatcataaagtttttga 574

                                                                       
Query: 68  atagtcatagttcccaaattgaatgaagtctgctgtcccaatttatactttagaatatca 127
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atagtcatagtttccaaattgaatgaagtctgctgtcccaatttatactttagaatatca 514

                                                                       
Query: 128 acatttataatgccgaaggatgtgaagaactgtaatcctaaacgcatgcggggtaagtca 187
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 513 acatttataatgccgaaggatgtgaagaactgtaatcctaaatgcatgcggggtaagtga 454

                                                                       
Query: 188 aggatgatggggagatgtagacacttaagtagacatctttctaactctacctcgaggtct 247
           ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aggatgatggggagacgtagatacttaagtagacatctttctaactctacctcgaggtct 394

                                                                       
Query: 248 ttaaagagaagcctataggatagtttgtctcatatttaaaccgggtcaaataaatcacaa 307
           |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 393 ttaaagagaagcctataggacagtttgtctcatatttaaaccgg-tcaaataaatcacaa 335

                                                                       
Query: 308 aatgaagtgctatgattttctcttaaaatcaacatttagttttttacttcatgtgttcaa 367
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 334 aatgaagtgctatgattttctcttaaaatcaacttttagttttttacttcatgtgttcaa 275

                                                                       
Query: 368 aacaattgcagatgcttaaaaattagacccacaaaaatgaaagtaaaatccccagcagtc 427
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 274 aacaattgcagatgcttaaaaattagacccacaaaaacgaaagtaaaatccccagcagtc 215

                  
Query: 428 cccccac 434
           |||||||
Sbjct: 214 cccccac 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space:   350200
Effective search space used:   350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)