Query= MSMg01no342_n02.b1 MSMg01no342_n02.b1 CHROMAT_FILE:
MSMg01no342_n02.b1 PHD_FILE: MSMg01no342_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:26 2005
(557 letters)
>mm_chr16_20547416_20548373
Length = 958
Score = 973 bits (503), Expect = 0.0
Identities = 538/555 (96%), Gaps = 13/555 (2%)
Strand = Plus / Plus
Query: 6 gaattcttg-t-atttcctatccctgcctcctgaatgttggagttattggcatgcaccgc 63
||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttgatcatt--ctatccctgcctcctgaatgttggagttattggcatgcaccgc 263
Query: 64 acccagttttatgaggtaccggggatcaaacacaaagcctcagggtagacaagcatttta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acccagttttatgaggtaccggggatcaaacacaaagcctcagggtagacaagcatttta 323
Query: 124 ccaactaatctataacctcaggcatgctgatagctttttttaactttaacaccaagactg 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 ccaactaatctataacctcaggcatgctgatagcttttttaaactttaacaccaagactg 383
Query: 184 gcagctccccattgcaataatgcttaagctggatgaatgggcagtcgagtgttgtcacat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcagctccccattgcaataatgcttaagctggatgaatgggcagtcgagtgttgtcacat 443
Query: 244 gcctttaattccagcactttggcgacaggtaggaggttcagttcttaagttagcttaggc 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 gcctttaattccagcactttggcgacaggcaggaggttcagttcttaagttagcttaggc 503
Query: 304 tatctagagagattgtctcggaaatataaacgggtgtaatttgagcgcattggaataaag 363
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctctagagagattgtctcggaaatataaacgggtgtaatttgagcgcattggaataaag 563
Query: 364 ttgtctaattttgcaaaatgagtgtgtgtgtgaggtgtatcttttacagacact-gagat 422
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 564 ttgtctaattttgcaaattgagtgtgtgtgtgaggtgtatcttttacagacacttgagat 623
Query: 423 ctgctttgtctgtagacccaggataaacaatgaacttataaaagggcttgttcaggtttt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgctttgtctgtagacccaggataaacaatgaacttataaaagggcttgttcaggtttt 683
Query: 483 ctggcagtgggtgatgtgccttggggtggtcgaaaaacagaacttcattctcaatgaccc 542
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 ctggcagtgggtgatgtgccttggggtgg--------cagaacttcattctcaatgaccc 735
Query: 543 agttgaacacctatg 557
|||||||||||||||
Sbjct: 736 agttgaacacctatg 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 958
Length adjustment: 10
Effective length of query: 547
Effective length of database: 948
Effective search space: 518556
Effective search space used: 518556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_n02.g1 MSMg01no342_n02.g1 CHROMAT_FILE:
MSMg01no342_n02.g1 PHD_FILE: MSMg01no342_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:26 2005
(127 letters)
>mm_chr16_20730029_20730556
Length = 528
Score = 224 bits (116), Expect = 1e-63
Identities = 125/128 (97%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 1 agcataggtctggctgctttggggccatgagaaaa-aacacagggggtgcgtgcaggcct 59
||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 328 agcataggtctggctgctttggggccatgagaaaataagaaagggggtgcgtgcaggcct 269
Query: 60 ggagaactttgtccagaggaacgtaatcctaattcccaccctcatatggtcattcttgtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggagaactttgtccagaggaacgtaatcctaattcccaccctcatatggtcattcttgtt 209
Query: 120 agcttaag 127
||||||||
Sbjct: 208 agcttaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 528
Length adjustment: 8
Effective length of query: 119
Effective length of database: 520
Effective search space: 61880
Effective search space used: 61880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
