Query= MSMg01no343_i22.b1 MSMg01no343_i22.b1 CHROMAT_FILE:
MSMg01no343_i22.b1 PHD_FILE: MSMg01no343_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:26 2005
(417 letters)
>mm_chr16_74388281_74389096
Length = 816
Score = 746 bits (386), Expect = 0.0
Identities = 407/414 (98%), Gaps = 1/414 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcgcaatctatcgtcttgccaatgtatttgactagacatcatagagtgttttc 63
||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 616 ggaatactcacaatctatcgtcttgccaatgtatttgactagacttcatagagtgttctc 557
Query: 64 ttcatgtgaaattacaaacctgcagaaaaattaatgcttttacattgtttttgttaaaat 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 556 ttcatgtgaaattacaaacctgcagaaaaattaatgctcttacattgtttttgttaaaat 497
Query: 124 tccatcttctattgtcacaataaaaaattaactacaatcagtagttaatttagttatatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tccatcttctattgtcacaataaaaaattaactacaatcagtagttaatttagttatatt 437
Query: 184 gttgccatagttatctttatttttaaatgagcttaaaagaagactatattgttatatgtt 243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 436 gttgccatagttatctttatttttaaatgagcttaaaagaaggctatattgttatatgtt 377
Query: 244 tttcagaaaaaaagtaagatctagaaatttatttgaacttcttaggataaattttaagta 303
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttcag-aaaaaagtaagatctagaaatttatttgaacttcttaggataaattttaagta 318
Query: 304 tacaaaaagttatagcaaagccttttacaatttaaattttatgttacatttatttagcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tacaaaaagttatagcaaagccttttacaatttaaattttatgttacatttatttagcta 258
Query: 364 caaataaaaacagaagactagtaatgttttaaacgtaatagaagttattttatt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 caaataaaaacagaagactagtaatgttttaaacgtaatagaagttattttatt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 816
Length adjustment: 9
Effective length of query: 408
Effective length of database: 807
Effective search space: 329256
Effective search space used: 329256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_i22.g1 MSMg01no343_i22.g1 CHROMAT_FILE:
MSMg01no343_i22.g1 PHD_FILE: MSMg01no343_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:26 2005
(365 letters)
>mm_chr16_74250509_74251273
Length = 765
Score = 629 bits (325), Expect = 0.0
Identities = 355/365 (97%)
Strand = Plus / Plus
Query: 1 atcatgaaatttcccatgaaaaagagtctgagcttggtgctgctgttggtgggaacctgg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcatgaaatttcccatgaaacagagtctgagcttggtgctgctgttggtgggaacctgg 260
Query: 61 tgtccaggtacaatagggcttagatgggagtatttcagaatccatgggttcaaggctatc 120
||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 261 tgtccagctacaatagggcttagatggaagtatttcagaatccatggattcaaggctatc 320
Query: 121 ttgtgcagcatggtgagatcaggtctataattgtaatgtatcagtaaagcaagaggatat 180
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 321 ttgtgcaacatggtgagatcaggtctataatcgtaatgtatcagtaaagcaagagaatat 380
Query: 181 gattatgagtctatttagttttttattgctgttgttgttgatgactgaaaattaatttgc 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattatgagtctatttggttttttattgctgttgttgttgatgactgaaaattaatttgt 440
Query: 241 acaccatgcatgttaaaaaggtgttagaaatgaacctctacatctaaatctagagactgc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaccatgcatgttaaaaatgtgttagaaatgaacctctacatctaaatctagagactgc 500
Query: 301 gcccctacaaatggccatgccactttaagcatttcagtaaaaggtaagaaaatcttttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcccctacaaatggccatgccactttaagcatttcagtaaaaggtaagaaaatcttttac 560
Query: 361 cattt 365
|||||
Sbjct: 561 cattt 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
