AAAAGGACGAGGANCNGGCGGAGTGCAGCGGTAGGANGCCTACAATGCAA
CCAAAAAATTTTTGAGGCACCTCCTGGGGAGTCTGGGTGGCGGGGAGGCG
GGGGGGGGGGTGGGGCGGGGTCGGGGGGTGGGGCGGTGGCGGGTGTGGGG
AATCGCCACANNNAAAAAAAAAAAACAATAATTTCCCCCAAAAACCCCGG
GGGAATCCCCTTCTTACCCTAAAAAAAAAACCCCCCCAAAAAAAAAAAAN
CCCCACAAAAAAAACCAGGGGAAAATCCCCCCCCCTCTTTTAAAAAAAAA
AAAAAAATCCCTCCCCCCCCCCCCCCTATAAAAAAAAAAAAATATACCCG
GGCACANNNCCTTTTCCCCCAAAAAAAAAAAAAAAGCGACACCCGCGGGC
ANACCAACNNNAAAAAAAACAACACACCCCCCACNAGCGGGCCCTCTTAA
AAAAAAAAAAAANNCNCCNCAAAAAAACCCCACCCCCCCCCCCCCCCCCC
CCCCCNAAAACAAAAATAAACAAAAATAAAAACAAAAAAAACAACAACAC
ACCCCCCNCCNCACNCACACAACCACCCACAACACACAACACCCAAAACC
ACTCCACACAACCACNCCANACACACCACCCCCCACACACCCCCCCCCCA
CANNCCACAAAAAACCCCNCACACAACACTAAAAACCCACCCCCCAACCC
ACACCCCAANCNCACACCACCCACANCACCCCTAACCCCACCTTATCATC
TAACCACACAACACCACACACACCACACCACATCTAACACCCACAAACNC
CCAAAACCNCNCACACAACACAACAACACANNCACANAACACAAACCAAC
ACACACAACCCANCACACTCCAATTCCTCCTCATTGTGGTGTGGTGGGTG
GGTGGGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCTTCTCTGGACCTCAAATTATCTGGTACTAT
TATCCACTAGTTGTCAGTAATATTGACTCCTTGACATAGTGCTAATTTGA
TGAGTATTTTATAATTTGGTGGTGGAATGTGTCTTGAAATTCAAGGTCTA
AAAAAAAAATTGTGTCACATCAGGCTGAAGACAATAAATTGCATTATAGA
ATGATTGTCAGATTGGTAGAAAATCTCAATGGAGCACACTTGATAGTATC
AAAACTTTTTAAAAAACTATTTTATTTGCTTCTCTCTGGCTTCAAAATAC
TGGCCTTGGTATCTTATAAGTTCACTCATTAGTTATGTAAACATATGTAA
ACACATTTATATTAAGTGAGCAATACAGCATCACATGTAAATTTTAACTG
TCCATCCACTATATGACTATATATACCGCATTCCCTAATTAATTATTATA
GAAAATTTATATAATTTTATAATAGTTTTTGAAGTAATATTTAGATAACA
CCAGAGTAGCCTTTCAAGGTCAATAAACACATCGGAAGTCATTTACAATG
AAAAATTCTTCCTCTGAAATTGAAAAACCTCCTCTGTTTTTATTGAAATA
ATATTCTTGGTGTTGAATGGATTTAATCAAACCTTTTAATTTTTTGATGA
ATGTATTACCCTTCTTAATCTTTGGACTTCTTTTTATAA

Query= MSMg01no343_l03.g1 MSMg01no343_l03.g1 CHROMAT_FILE:
MSMg01no343_l03.g1 PHD_FILE: MSMg01no343_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:37 2005
         (468 letters)



>mm_chr16_66108486_66109354
          Length = 869

 Score =  868 bits (449), Expect = 0.0
 Identities = 464/469 (98%), Gaps = 1/469 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttctctggacctcaaattatctggtactattatccactagttgtcagtaatattgact 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tcttctctggacctcaaattatctggtactattatccagtagttgtcagtaatattgact 260

                                                                       
Query: 61  ccttgacatagtgctaatttgatgagtattttataatttggtggtggaatgtgtcttgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttgacatagtgctaatttgatgagtattttataatttggtggtggaatgtgtcttgaa 320

                                                                       
Query: 121 attcaaggtct-aaaaaaaaaattgtgtcacatcaggctgaagacaataaattgcattat 179
           ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 attcaaggtctaaaaaaaaaaattgtgtcacatcaggcagaagacaataaattgcattat 380

                                                                       
Query: 180 agaatgattgtcagattggtagaaaatctcaatggagcacacttgatagtatcaaaactt 239
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 agaatgattgtcagattggtagaaaatctcaatgaagcacacttgatagtatcaaaactt 440

                                                                       
Query: 240 tttaaaaaactattttatttgcttctctctggcttcaaaatactggccttggtatcttat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaaaaaactattttatttgcttctctctggcttcaaaatactggccttggtatcttat 500

                                                                       
Query: 300 aagttcactcattagttatgtaaacatatgtaaacacatttatattaagtgagcaataca 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagttcactcattagttatgtaaacatatgtaaacacatttatattaagtgagcaataca 560

                                                                       
Query: 360 gcatcacatgtaaattttaactgtccatccactatatgactatatataccgcattcccta 419
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 gcatcacatgtaaattttaactgtccatccactatatgactatatataccgcatccccta 620

                                                            
Query: 420 attaattattatagaaaatttatataattttataatagtttttgaagta 468
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attaattattatagaaaatttatataattttataatagtttttgaagta 669


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 869
Length adjustment: 10
Effective length of query: 458
Effective length of database: 859
Effective search space:   393422
Effective search space used:   393422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)