Query= MSMg01no344_e19.b1 MSMg01no344_e19.b1 CHROMAT_FILE:
MSMg01no344_e19.b1 PHD_FILE: MSMg01no344_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:26 2005
(388 letters)
>mm_chr16_34965301_34966088
Length = 788
Score = 282 bits (146), Expect = 2e-80
Identities = 173/182 (95%)
Strand = Plus / Plus
Query: 62 aagggtcaaacaggggctctaaatttggaaaacttccccgtttaatgaacaactgaatgg 121
|||||||||||| |||||||| ||||| |||||||||| |||||||| |||||||||||
Sbjct: 262 aagggtcaaacaagggctctagatttgaaaaacttccctgtttaatggacaactgaatga 321
Query: 122 catcaatgaggtcacccagaggttagagaagtcaacattaatgccacagtgtgaaagccc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 catcaatgaggtcacccagaggttagagaagtcaacattaatgccacagtgtgaaagccc 381
Query: 182 ataggtctagaagaaatctggagttagttcactgtggacatcgggggcggggcaagtttc 241
|| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 382 atgggtctagaagaaatctggaattagttcactgtggacatcgggagcggggcaagtttc 441
Query: 242 aa 243
||
Sbjct: 442 aa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_e19.g1 MSMg01no344_e19.g1 CHROMAT_FILE:
MSMg01no344_e19.g1 PHD_FILE: MSMg01no344_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:26 2005
(455 letters)
>mm_chr16_35125319_35126172
Length = 854
Score = 857 bits (443), Expect = 0.0
Identities = 452/455 (99%), Gaps = 1/455 (0%)
Strand = Plus / Minus
Query: 1 catgggcccgtgaaattcctacaggagctgagcaattcctaaatggggaaaggccttgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 catgggcccgtgaaattcctacaggagctgagcaattcctaaatggggaaaggccttgca 595
Query: 61 aacctcaagtctgactgttcttcattttcttccttccctggcacataccccttcccctgg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 594 aacctcaagtctgactgttcttcagtttcttccttccctggcacataccccttcccctgg 535
Query: 121 cacacacccctcccagccttccaaccctcgctgtttactgagggttctgtctcctgtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cacacacccctcccagccttccaaccctcgctgtttactgagggttctgtctcctgtaca 475
Query: 181 tcaaacccagctggaaggcaaaggcccaagtcaagcccctacacaggtgagggatcagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcaaacccagctggaaggcaaaggcccaagtcaagcccctacacaggtgagggatcagac 415
Query: 241 acagacctcacacctcacaggcatcttcaattgcattgcatgagctttgatggaaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 414 acagacctcacacctcacaggcatcttcaattgcattgcatgagctttgatgg-aaaaaa 356
Query: 301 aaatacagagacacaggggtgatggcttggaggaaaacggagattgtactgagttggagt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 355 aaatacagagacacaggggtgatggcttggaggtaaacggagattgtactgagttggagt 296
Query: 361 tccatgagaagtagggcttgagaaaccctggaagacagagttaactaggagaggggaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tccatgagaagtagggcttgagaaaccctggaagacagagttaactaggagaggggaagg 236
Query: 421 cacgagggacagagaggccaagccagggttaggtt 455
|||||||||||||||||||||||||||||||||||
Sbjct: 235 cacgagggacagagaggccaagccagggttaggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 854
Length adjustment: 10
Effective length of query: 445
Effective length of database: 844
Effective search space: 375580
Effective search space used: 375580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
