Query= MSMg01no348_i02.b1 MSMg01no348_i02.b1 CHROMAT_FILE:
MSMg01no348_i02.b1 PHD_FILE: MSMg01no348_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:49 2005
(470 letters)
>mm_chr16_44465371_44466240
Length = 870
Score = 750 bits (388), Expect = 0.0
Identities = 433/458 (94%), Gaps = 16/458 (3%)
Strand = Plus / Minus
Query: 5 gaattcatgtgtgcctacttgtgctcggctcactttcttcactgttatagcattctgaat 64
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 gaattcatgtgtgcatactcgtgctcggctcactttcttcactgttatagcattctgaat 736
Query: 65 ccccatcctaggaaatggtgccacccatgacagacaggccttcccatctcaatgaacata 124
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 735 ccccatcctagaaaatggtgccactcatgacagacaggccttcccatctcaatgaacata 676
Query: 125 atcaggataaatcccagagacatgcccttagaccagcctaatctagataatccttcattg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 atcaggataaatcccagagacatgcccttagaccagcctaatctagataatccttcattg 616
Query: 185 aggacctcttcccaggtgacgctagactg----------------aaaactagtcactgc 228
||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 615 aggacctcttcccaggtgacgctagactgaatcaagttgacaattaaaactaaccactgc 556
Query: 229 caaggggaagctgtgattctagcctctgtccctttctatgaagcaactagatacccactg 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 caaggggaagctgtgattctagcctctgtccctttctatgaagcaactagatacccactg 496
Query: 289 gtgtcccaccacaagacaacagttgtaggctcttcaccatgaccaaagcaaccaacatca 348
||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||
Sbjct: 495 gtgtcccaccacaagacaagaattgtaggctcttcatcatgaccaaagcaaccaacatca 436
Query: 349 gcatcgctgtcagttacagagttgtgatggttagttaccatcattatcaacttgcgtgga 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcatcgctgtcagttacagagttgtgatggttagttaccatcattatcaacttgcgtgga 376
Query: 409 tttgaactcacctaagacatacacctttggaggtgtct 446
||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tttgaactcacctaagacatacacctttggaggtgtct 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_i02.g1 MSMg01no348_i02.g1 CHROMAT_FILE:
MSMg01no348_i02.g1 PHD_FILE: MSMg01no348_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:49 2005
(498 letters)
>mm_chr16_44286286_44287183
Length = 898
Score = 949 bits (491), Expect = 0.0
Identities = 491/491 (100%)
Strand = Plus / Plus
Query: 1 cacattgtggtccagatcatacactggacactaaagcacaggagagacaaaagagagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacattgtggtccagatcatacactggacactaaagcacaggagagacaaaagagagggg 260
Query: 61 aacagcattgtcactcagtgttcttccacaggcaggtgtcaactctatgccacctgcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagcattgtcactcagtgttcttccacaggcaggtgtcaactctatgccacctgcatc 320
Query: 121 acaggccagaggaatcagattaatctagacactgtggaaactattctgcagaacagtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaggccagaggaatcagattaatctagacactgtggaaactattctgcagaacagtcat 380
Query: 181 gaaatggccctcttaaaacttgggctttgcatggcagggtggcatacacctttaatgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatggccctcttaaaacttgggctttgcatggcagggtggcatacacctttaatgcca 440
Query: 241 gcactcaggacacagaggcagggggatctctgagttcgagcccagcctggtctacagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcactcaggacacagaggcagggggatctctgagttcgagcccagcctggtctacagagt 500
Query: 301 aagttctaggacagccagggctacacagagaaactccatctcaaaaaccaaccaaacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagttctaggacagccagggctacacagagaaactccatctcaaaaaccaaccaaacaaa 560
Query: 361 caaacaaccaaacaaaaaccttggactttgatctaaaatgttagagtcactctatattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaacaaccaaacaaaaaccttggactttgatctaaaatgttagagtcactctatattta 620
Query: 421 agagaactataagaagattgctttaaaatatataaccccctccctctttttttttttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagaactataagaagattgctttaaaatatataaccccctccctctttttttttttttt 680
Query: 481 ttttttttttt 491
|||||||||||
Sbjct: 681 ttttttttttt 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
