Query= MSMg01no348_j14.b1 MSMg01no348_j14.b1 CHROMAT_FILE:
MSMg01no348_j14.b1 PHD_FILE: MSMg01no348_j14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:57 2005
(588 letters)
>mm_chr16_51661275_51662262
Length = 988
Score = 1060 bits (548), Expect = 0.0
Identities = 575/584 (98%)
Strand = Plus / Plus
Query: 5 gaattctgatagtagctgtaagtattcccaagaagaaataagcatccataatgagaaact 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgatagcatttgtaagtattcccaagaagaaataagcatccataatgagaaact 264
Query: 65 gaataaatattgatatacccatctacagcaaaattaaattaattagaaataaatattaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaataaatattgatatacccatctacagcaaaattaaattaattagaaataaatattaaa 324
Query: 125 caatattaacttaatttctagaaatttcccttgtattccttaacaaattgtacttggcag 184
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 cgatattaacttaatttctagaaatttcccctgtattccttaacaaattgtacttggcag 384
Query: 185 tattgtgtcactgttctctataaataaattcatttggtatttaaggatccttattctata 244
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 tattgtgtcactattctctataaataaattcatttggtatttaaggatctttattctata 444
Query: 245 ggttgccttatctgtgatttcatttctaaaccatagaagtagtttgaacttttgacttca 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggttgtcttatctgtgatttcatttctaaaccatagaagtagtttgaacttttgacttca 504
Query: 305 ttcttaatattctagaaagaaaggcaatatattgtctttcagagttttgaggtatttttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttcttaatattctagaaagaaaggcaatatattgtctttcagagttttgaggtatttttc 564
Query: 365 acatgaaagcctttggcttcagtctctactgaccagatgacaagtattgtgaccacattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acatgaaagcctttggcttcagtctctactgaccagatgacaagtattgtgaccacattt 624
Query: 425 tttaaggatccagcttaattatgttggctcttggaaaccagaatttcctgccttaaatta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttaaggatccagcttaattatgttggctcttggaaaccagaatttcctgccttaaatta 684
Query: 485 actgtgaaagcgattcacactccatccatgataacctctttacaagtaagacatttttaa 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 685 actgtgaaagcgattcacactccatccatgataacctctttacaattaagacatttttaa 744
Query: 545 aatggtgagcattccacagatgagtgaactcctctctgaacaag 588
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatggtgagcattccacagatgagtgaactcctctctgaacaag 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_j14.g1 MSMg01no348_j14.g1 CHROMAT_FILE:
MSMg01no348_j14.g1 PHD_FILE: MSMg01no348_j14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:57 2005
(246 letters)
>mm_chr16_51809430_51810074
Length = 645
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 cagtgtcttgtgagtacaggaggtttgtggttaacatggcttactatttgcaagcacaaa 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 cagtgtcttgtgagtacaggaggtttgtggttaacatggcttaccatttgcaagcacaaa 384
Query: 61 catgtgattagcagagggaagttttatctcaagctgtccaggcatgggtcttttagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catgtgattagcagagggaagttttatctcaagctgtccaggcatgggtcttttagtatt 324
Query: 121 tgagtgtaggagaaaggaagttgggacagttgtgagtggactgtgcctttaaggaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgagtgtaggagaaaggaagttgggacagttgtgagtggactgtgcctttaaggaaaatt 264
Query: 181 gacctagactttatctatattgcctccatggaaaaaaaaatctgttatccaaggctgaat 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 263 gacctagactttatctatattgcctccatgg-aaaaaaaatctgttatccaaggctgaat 205
Query: 241 ttac 244
||||
Sbjct: 204 ttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 645
Length adjustment: 9
Effective length of query: 237
Effective length of database: 636
Effective search space: 150732
Effective search space used: 150732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
