Query= MSMg01no349_e19.b1 MSMg01no349_e19.b1 CHROMAT_FILE:
MSMg01no349_e19.b1 PHD_FILE: MSMg01no349_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:52 2005
(661 letters)
>mm_chr16_4398880_4399940
Length = 1061
Score = 1239 bits (641), Expect = 0.0
Identities = 653/657 (99%)
Strand = Plus / Minus
Query: 5 gaattcccacaggttatgcgtgtgtgccctgacaccgaactgggctggactccctttccc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gaattcccacaggttatgagtgtgtgccctgacaccgaactgggctggactccctttccc 802
Query: 65 agccagtgacccacctgaaaatataactttgtgagctaggtcagatgggtcacaacatgg 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 801 agccagtgacccacctgaaaatataactttgtgagctaggtcaggtgggtcacaacatgg 742
Query: 125 ccaggttatacctacattggggatgccctctaaagcttttagccagccctcagtcagtca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccaggttatacctacattggggatgccctctaaagcttttagccagccctcagtcagtca 682
Query: 185 cacaaatgtgtgttgttagctgggatgtaactgatgcctacagataaaattgtgcagggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacaaatgtgtgttgttagctgggatgtaactgatgcctacagataaaattgtgcagggt 622
Query: 245 gagtagagcttccttaagagacaaggggagctgtaatgggtgtcaagctgagaatgtgct 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 gagtagagcttccttaagagacaaggggagctggaatgggtgtcaagctgagaatgtgct 562
Query: 305 ggaaggtggctggcagtgtgtagtcaggcttcattttgctgttttgttttatcatgttgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaaggtggctggcagtgtgtagtcaggcttcattttgctgttttgttttatcatgttgt 502
Query: 365 atttgggacagtcttgcttggtggtctgacattcactgtgtagacatggcaatcttttgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttgggacagtcttgcttggtggtctgacattcactgtgtagacatggcaatcttttgg 442
Query: 425 cttctgcttccatgggcttagaaaacaggcatgcattattacttctagtgatgatgtttt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctgcttccatgggcttagaaaacaggcatgcattattacttctagtgatgatgtttt 382
Query: 485 ttaacatgaattttttgttgttttgataattttatacatgcataataactaacaacactt 544
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaacttgaattttttgttgttttgataattttatacatgcataataactaacaacactt 322
Query: 545 gatttttttaaaaagccacaattgtgaaatccattggttgaacataggttttgagtgcct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttttttaaaaagccacaattgtgaaatccattggttgaacataggttttgagtgcct 262
Query: 605 gctatagatataggccactgtctcaggatctcctagactgcttgactcctctggtgg 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctatagatataggccactgtctcaggatctcctagactgcttgactcctctggtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_e19.g1 MSMg01no349_e19.g1 CHROMAT_FILE:
MSMg01no349_e19.g1 PHD_FILE: MSMg01no349_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:52 2005
(513 letters)
>mm_chr16_4223773_4224685
Length = 913
Score = 992 bits (513), Expect = 0.0
Identities = 513/513 (100%)
Strand = Plus / Plus
Query: 1 cattctcagtgtttcactaaaaactgcacttggtaagggcatcggagtccacagattgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattctcagtgtttcactaaaaactgcacttggtaagggcatcggagtccacagattgca 260
Query: 61 atagttaaacatctaatcggttgtttctaatttaatgcatgggtacacttgtagatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagttaaacatctaatcggttgtttctaatttaatgcatgggtacacttgtagatgcag 320
Query: 121 gtgcgttgcacctgtgtacatgcctggagagtccagggtcaatgtcagaacctcctaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcgttgcacctgtgtacatgcctggagagtccagggtcaatgtcagaacctcctaagt 380
Query: 181 cattcttcatcttcctcttgaggcaggatcgctcactgctctgattcagctcactgactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattcttcatcttcctcttgaggcaggatcgctcactgctctgattcagctcactgactc 440
Query: 241 agctagtctggctggccaggaagcatccacatatcctcttggctttgcccctccagagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctagtctggctggccaggaagcatccacatatcctcttggctttgcccctccagagtt 500
Query: 301 tggtttacaaacgcccctgagatgcacagatatagcttttatgtggatgctgggactgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtttacaaacgcccctgagatgcacagatatagcttttatgtggatgctgggactgaa 560
Query: 361 ctcaggtcctcctgcttgggccttcttcacctcagcctctcagccgacccatgagcagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaggtcctcctgcttgggccttcttcacctcagcctctcagccgacccatgagcagcc 620
Query: 421 tcccacagaatgactgctttgttcttgaaggcctagcttttctcatccctccagctcagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcccacagaatgactgctttgttcttgaaggcctagcttttctcatccctccagctcagg 680
Query: 481 ctcctctgatgatgtttcgtcttcattctgagc 513
|||||||||||||||||||||||||||||||||
Sbjct: 681 ctcctctgatgatgtttcgtcttcattctgagc 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
