Query= MSMg01no349_k20.b1 MSMg01no349_k20.b1 CHROMAT_FILE:
MSMg01no349_k20.b1 PHD_FILE: MSMg01no349_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:21 2005
(666 letters)
>mm_chr16_79756800_79757868
Length = 1069
Score = 1208 bits (625), Expect = 0.0
Identities = 654/665 (98%), Gaps = 3/665 (0%)
Strand = Plus / Minus
Query: 5 gaattcattgtactctcacagttttcaaagttatattgtaaatccctctctcctctgaat 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 gaattcattgtactctcaaagttttcaaagttatattgtaaatccctctctcctctgaat 810
Query: 65 gttctcaatcttggctgcatttgaacaggccttttaaaattcaacagtcctgttaactga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gttctcaatcttggctgcatttgaacaggccttttaaaattcaacagtcctgttaactga 750
Query: 125 caagtcagaggctggcataattagaacatgaaatgtatactgtcgggtcaccttatagct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 caagtcagaggctggcataattagaacatgaaatgtatactgtcgggtcaccttatagct 690
Query: 185 gcagtgtaaatcccatctcaaataactcactcatcaggctttgacatgaaggcttcaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gcagtgtaaatcccatctcaaataactcactcatcaggctttgacatgaaggcttcaaag 630
Query: 245 aacttccttattctttgaggcaagttaattcttttgttcgtagatgttgtagagattgga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aacttccttattctttgaggcaagttaattcttttgttcgtagatgttgtagagattgga 570
Query: 305 tatgtataaacgttttaagtctacttttggctccactcttgactactttcaaacatcctt 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 569 aatgtataaacattttaagtctacttttggctccactcttgactactttcaaacttcctt 510
Query: 365 aatctggaaaaatctctgcttactctgcacagtattttattgaaaacacactttgataca 424
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aatctggaaaaatctctgctcactctgcacagtattttattgaaaacacactttgataca 450
Query: 425 ttttgttgttcaagaacaggctatttagtaggcacttagta---gttggagagctcggaa 481
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 449 ttttgttgttcaagaacaggctatttagtaggcacttagtatgtgttggagagctcggaa 390
Query: 482 agaatacatgatgatacataagatgaatcaaggaacattttatgaattgtgtagatttca 541
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 389 agaatacatgatgatacataagataaatcaaggaacattttatgaattgtgtagatttca 330
Query: 542 gttttcaaagaacaaacttattgttactttagttttaaggggatccacattcatttttct 601
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 329 gttttcaaagaacaaacttattgttacttgagttttaaggggatccacattcatttttct 270
Query: 602 gaaaagcctaaatgactgacactgtaatgatttttggcttaaaatgttaatctcctaact 661
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gaaaagcctaaatgactgaaactgtaatgatttttggcttaaaatgttaatctcctaact 210
Query: 662 gaaga 666
|||||
Sbjct: 209 gaaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1069
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1059
Effective search space: 694704
Effective search space used: 694704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_k20.g1 MSMg01no349_k20.g1 CHROMAT_FILE:
MSMg01no349_k20.g1 PHD_FILE: MSMg01no349_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:21 2005
(576 letters)
>mm_chr16_79558764_79559739
Length = 976
Score = 1098 bits (568), Expect = 0.0
Identities = 574/576 (99%)
Strand = Plus / Plus
Query: 1 aaaatggagacttcttgaaaaattataataccaatttgtaaagaaaacatagctgcatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatggagacttcttgaaaaattataataccaatttgtaaagaaaacatagctgcatac 260
Query: 61 atgtatatatgtataggtatgtatttgcatttcctatctattggtatcattccatgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtatatatgtataggtatgtatttgcatttcctatctattggtatcattccatgtata 320
Query: 121 ataattatttatgtttaacatcaatgcatcaatatacatgtaactataaaacttatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataattatttatgtttaacatcaatgcatcaatatacatgtaactataaaacttatttgc 380
Query: 181 atgcatcaatatttaacattgcttatagtatgtttacacatattttatagttttaaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcatcaatatttaacattgcttatagtatgtttacacatattttatagttttaaatta 440
Query: 241 gttttatttactgatgttcactgatcataatgaaacttggtatttttatgtgccatgtat 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gttttatttactgatgttcactgatgataatgaaacttggtatttttatgtgccatgtat 500
Query: 301 gtcaaacagactttattatttcttatctctttccatagttcccccatttattctgacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcaaacagactttattatttcttatctctttccatagttcccccatttattctgacttc 560
Query: 361 cattcccttcaccaaggcacttttctattctaatttgaaattgtgttaaaacagagaaat 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttcccttcaccaaggcacttttctattctaatttgaaattgtgttaaaacagagaaat 620
Query: 421 aatttcatcatcttatttttattccttctatgcccaaagattgaaaaatatttctgaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatttcatcatcttatttttattccttctatgcccaaagattgaaaaatatttctgaaaa 680
Query: 481 tgagtcatttttctttgtccctctgagttcacattaaatcagttgtcaataacataatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgagtcatttttctttgtccctctgagttcacattaaatcagttgtcaataacataatat 740
Query: 541 taggcaggtcttataagaaacagggagaaactataa 576
||||||||||||||||||||||||||||||||||||
Sbjct: 741 taggcaggtcttataagaaacagggagaaactataa 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
