Query= MSMg01no349_n03.b1 MSMg01no349_n03.b1 CHROMAT_FILE:
MSMg01no349_n03.b1 PHD_FILE: MSMg01no349_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:33 2005
(541 letters)
>mm_chr16_45548738_45549677
Length = 940
Score = 1031 bits (533), Expect = 0.0
Identities = 536/537 (99%), Gaps = 1/537 (0%)
Strand = Plus / Plus
Query: 5 gaattcactgccagtcttgggctaactgagactgtctctatacaaatgaagacatgggca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactgccag-cttgggctaactgagactgtctctatacaaatgaagacatgggca 263
Query: 65 agccaaagaaaactcagcaacaacaataaaacaataaaatggaaggaaaactgtctttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agccaaagaaaactcagcaacaacaataaaacaataaaatggaaggaaaactgtctttgg 323
Query: 125 aacttaggaagaaatcagagaagcacaaagcatttcatgtaaaaatatacaatgaggaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacttaggaagaaatcagagaagcacaaagcatttcatgtaaaaatatacaatgaggaat 383
Query: 185 tgccttcaggaaaagaagacaatcacatcgtccaacaatgaaaagttactagtctgtcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgccttcaggaaaagaagacaatcacatcgtccaacaatgaaaagttactagtctgtcag 443
Query: 245 gtgacagaccaaaaaaaacataaaagaaattgactgggcagagacaatgttttatttact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgacagaccaaaaaaaacataaaagaaattgactgggcagagacaatgttttatttact 503
Query: 305 tctatattcctctgccaagtaagcctgtatcctgaacaatgcatgtgaggaaatactgat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctatattcctctgccaagtaagcctgtatcctgaacaatgcatgtgaggaaatactgat 563
Query: 365 ttggggttcaggttgcagaaggttgcagtccatccatcataaagggacactatgagggac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttggggttcaggttgcagaaggttgcagtccatccatcataaagggacactatgagggac 623
Query: 425 tgatatgacacacatcagccataaatgtcatcaattaccatggaaatacaaacaaggcac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgatatgacacacatcagccataaatgtcatcaattaccatggaaatacaaacaaggcac 683
Query: 485 acaataagatatcacctctattgactcctattcaattgacatttgtaaaaaataaat 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acaataagatatcacctctattgactcctattcaattgacatttgtaaaaaataaat 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space: 493830
Effective search space used: 493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_n03.g1 MSMg01no349_n03.g1 CHROMAT_FILE:
MSMg01no349_n03.g1 PHD_FILE: MSMg01no349_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:33 2005
(546 letters)
>mm_chr16_45692135_45693080
Length = 946
Score = 1056 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Minus
Query: 1 acagaatcaaatgacagaaggtagaggagaaaataagagaggaggagaggaaacagctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 acagaatcaaatgacagaaggtagaggagaaaataagagaggaggagaggaaacagctaa 577
Query: 61 ataatgcatttcccccttttcaagcaatccaatgcccataaaccagcaattttaccagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ataatgcatttcccccttttcaagcaatccaatgcccataaaccagcaattttaccagct 517
Query: 121 agtgagtcatctacttcatttctcgcttttgtttagaaagattcttttatttatgattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agtgagtcatctacttcatttctcgcttttgtttagaaagattcttttatttatgattga 457
Query: 181 gaaactgagtcaccaaccagtttagcggctgtcaatgacaaaaagacagtgtcggcatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gaaactgagtcaccaaccagtttagcggctgtcaatgacaaaaagacagtgtcggcatcc 397
Query: 241 aaccctccaggccagcgaaaataatcacacctctttagtttgtctccctagccctgctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaccctccaggccagcgaaaataatcacacctctttagtttgtctccctagccctgctag 337
Query: 301 gaagttacaatgaggaaatcagcatattcatgtgagaagctcacatgtatgcttattttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gaagttacaatgaggaaatcagcatattcatgtgagaagctcacatgtatgcttattttt 277
Query: 361 aatcttgccaccagacataaaaacaagaaatcaagagaaaatcagaataatacaagcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aatcttgccaccagacataaaaacaagaaatcaagagaaaatcagaataatacaagcctt 217
Query: 421 taaaggccatcaacatctgggtatggcagtatgttcttgtaatcccaacacctaggacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 taaaggccatcaacatctgggtatggcagtatgttcttgtaatcccaacacctaggacac 157
Query: 481 tgagacaggagaattgtgagttcaagggcagcttgagctacataggaagatcttgtctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tgagacaggagaattgtgagttcaagggcagcttgagctacataggaagatcttgtctca 97
Query: 541 tgaaac 546
||||||
Sbjct: 96 tgaaac 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
