CCCACAAANTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCCACACTCACATCTTCTAGCACTCTAGGAATCCTC
AGAATTCTGGTGGCATATATGAGAGGGAGGGCTGTTTGCCATTATAATTT
GTGTAGCAAGCCAAGTTTGAGTTCAGCTGTATCTAGGCTAGTAAGGCTGA
GGGCAAAGCCGGGTAAGAAAATTGTCCAAAAATCACAAAAAATAACTTCA
ATCATGTGAAGTTTCTTTTAATGACCTTTTCCTCATATCGACATGGAATT
GCTTTTCTTGTTAAATATATCTTTAAATAGAATCTTGTTTTTTAAAACAA
AAATATTATATGGTATTAAATCATTTGGAAGTCAGTGAGCATTGCCTTTA
TTACAATTATATAAAAATTCAAAACCTTTAAAGCTTTATATCATGCTACT
ATTTGGTGTTATGAATGTATTCTTATTTTGGNATTTATTTACTCATATAN
ATGTAATGTCTTCTGTTAACCAGTTCACTTCCCCAAAGACATTACTTTCA
TTGTCATGACAAATAAAATCATTGCCCAGACATGACTTTCTGTTGGGTCC
AAAAATTCCCTTTATCCCCACATTTAAAACCATTAAATAACCTTTTCCTT
ATGAGGGGAAACCCCCCCTGCCCCCCAAAAAATTGGGACTCCTTTGTGGG
ATTAGACCAACCAACCCGGCTTTTTTTTCCTCATCGAAGCGGTTCCCCGC
TAG

NNTTTTTTTTCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAAT
ACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATC
AGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAG
AATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTG
GAGAAACAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAA
CCACTCTGGAAATCCGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACT
ACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCC
CAACTAGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTT
ATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATG
GATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTAATA
AAAAAATGAATTTATGAAATTCCTAGCCAAAAGGATGGACCGGAAGGGTC
TCCTCCTGGAGGAGGTAACACTTTCTCAAGGAACTCCCACATTATGTCTT
CCCGATAAGGGGGTATTAACCCCCCCCCCTGTTACCCCCGAATATAAAAT
ATTTTTCTAAATCTTGAGACTCTTAAAAAATATATACGAGTGGGGTCCTC

Query= MSMg01no350_d08.b1 MSMg01no350_d08.b1 CHROMAT_FILE:
MSMg01no350_d08.b1 PHD_FILE: MSMg01no350_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:04 2005
         (412 letters)



>mm_chr16_46843114_46843925
          Length = 812

 Score =  766 bits (396), Expect = 0.0
 Identities = 405/408 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacactcacatcttctagcactctaggaatcctcagaattctggtggcatatat 64
           ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 205 gaattccacactcacatcttctagcactctaagaatcctcggaattctggtggcatatat 264

                                                                       
Query: 65  gagagggagggctgtttgccattataatttgtgtagcaagccaagtttgagttcagctgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagagggagggctgtttgccattataatttgtgtagcaagccaagtttgagttcagctgt 324

                                                                       
Query: 125 atctaggctagtaaggctgagggcaaagccgggtaagaaaattgtccaaaaatcacaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atctaggctagtaaggctgagggcaaagccgggtaagaaaattgtccaaaaatcacaaaa 384

                                                                       
Query: 185 aataacttcaatcatgtgaagtttcttttaatgaccttttcctcatatcgacatggaatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aataacttcaatcatgtgaagtttcttttaatgaccttttcctcatatcgacatggaatt 444

                                                                       
Query: 245 gcttttcttgttaaatatatctttaaatagaatcttgttttttaaaacaaaaatattata 304
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 gcttttcttgttaaatatatctttaaatagaatcttgttttttaaaataaaaatattata 504

                                                                       
Query: 305 tggtattaaatcatttggaagtcagtgagcattgcctttattacaattatataaaaattc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggtattaaatcatttggaagtcagtgagcattgcctttattacaattatataaaaattc 564

                                                           
Query: 365 aaaacctttaaagctttatatcatgctactatttggtgttatgaatgt 412
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaacctttaaagctttatatcatgctactatttggtgttatgaatgt 612


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space:   323609
Effective search space used:   323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)