Query= MSMg01no352_d10.b1 MSMg01no352_d10.b1 CHROMAT_FILE:
MSMg01no352_d10.b1 PHD_FILE: MSMg01no352_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:40 2005
(512 letters)
>mm_chr16_8169594_8170506
Length = 913
Score = 866 bits (448), Expect = 0.0
Identities = 493/508 (97%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 6 aattctcactggcctcgaacgcagttattcagttaagatcactagccagtaagccccaag 65
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattctcactggcctagaactcagttattcagttaagatcactagccagtaagccccaag 265
Query: 66 gatcggctgtctctacctccccagtgctggattcctagcaagtatgtgcctccacatctg 125
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 266 gatcagctgtctctacctccccagcgctggattcctagcaagtatgtgcctccacatctg 325
Query: 126 gctatgttacatgggttctggggatcaaacttagttcctcttacatgcatggctagtatt 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gctatgttacatgggttctggggatcaaacttagttcctcttacatgcatggctagtatt 385
Query: 186 ttaatgactaagctatctgttcagactaaaattttgacagtctttgggatcagcctatat 245
|||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||
Sbjct: 386 ttaatgactaagctatctcttcagactaaaattttcacagtctttgagatcagcctatat 445
Query: 246 cctatatttatctctcctccatgtgtcctctactacagacacgttttcccttgggtctgc 305
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 446 cctatatttatctctcctccatgtgtcctctactacagacacaatttcccttgggtctgc 505
Query: 306 acatagacttaatggcagatctctgtctccacctttctctatactttaaagaattcttct 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 acatagacttaatggcagatctctgtctccacctttctctatactttaaagaattcttct 565
Query: 366 agcttcagtatcatctgagatataaagctttctttaccattcaagacaaatgcaactgca 425
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 566 agcttcagtatcatctgagatataaagctatccttaccattcaagacaaatgcaactgca 625
Query: 426 cccccatct-acacagtgtatgtgtgctcaattgtatcttcctaaatatgctaatttctt 484
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 626 cccccatcttacacagtgtatgagtgctcaattgtatcttcctaaatatgctaatttgtt 685
Query: 485 tactaactatagtgccttgcacatgtaa 512
||||||||||||||| ||||||||||||
Sbjct: 686 tactaactatagtgctttgcacatgtaa 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space: 453306
Effective search space used: 453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_d10.g1 MSMg01no352_d10.g1 CHROMAT_FILE:
MSMg01no352_d10.g1 PHD_FILE: MSMg01no352_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:40 2005
(361 letters)
>mm_chr16_8349815_8350575
Length = 761
Score = 690 bits (357), Expect = 0.0
Identities = 360/361 (99%)
Strand = Plus / Minus
Query: 1 tttctttgtttctttttcctcccttcctccctgcctctcttctccttccttcctttcttg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 746 tttctttgtttctttttcctcccttcctccctgcctctcttctctttccttcctttcttg 687
Query: 61 tcaatggctattgaagcttctgaattgccatcgactacacaccaatgagtagatgggctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tcaatggctattgaagcttctgaattgccatcgactacacaccaatgagtagatgggctg 627
Query: 121 agctccagtaaaactttatttacagagcaggcagtggaccagagtcagcttgtcagtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agctccagtaaaactttatttacagagcaggcagtggaccagagtcagcttgtcagtcct 567
Query: 181 tggttgtgttgaaaccgttgggatatagtactgtaggacccagcttctgaagagagccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tggttgtgttgaaaccgttgggatatagtactgtaggacccagcttctgaagagagccaa 507
Query: 241 catgtgtatagctaacatgatgttctagacgaggaagcaaatgaggaaacctgttgtcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 catgtgtatagctaacatgatgttctagacgaggaagcaaatgaggaaacctgttgtcag 447
Query: 301 ggagtgttacaagccaacctgggcctgttggctataaacagactgattcaggaagcagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggagtgttacaagccaacctgggcctgttggctataaacagactgattcaggaagcagat 387
Query: 361 a 361
|
Sbjct: 386 a 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
