Query= MSMg01no352_d13.b1 MSMg01no352_d13.b1 CHROMAT_FILE:
MSMg01no352_d13.b1 PHD_FILE: MSMg01no352_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:41 2005
(346 letters)
>mm_chr16_94006792_94007536
Length = 745
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 5 gaattctaagaatttcaaggagggctaccatccaagaagtcattcagcacaatccactca 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 545 gaattctaagaatttcaaggagggctaccatccaagaagtcgttcagcacaatccacaca 486
Query: 65 tgaattcagatagcaaaaactggggtaacctgggatcaaacagtgaagtcctgaggaatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgaattcagatagcaaaaactggggtaacctgggatcaaacagtgaagtcctgaggaatg 426
Query: 125 tgttgtcggtatgggcgtggccaggtctaggatcccagagacaaggcccggggaggaaag 184
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 425 tgttgtcggtatgggcgtggccaggtctaggatcccagagacaaggcctagggaggaaag 366
Query: 185 gctccgccctctccagggggcaaggttcatgggggggtgggcaaagcccttctcttggtt 244
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 365 gctccgccctctccagggggcaaggttcat-ggggggtgggcaaagcccttctcttggtg 307
Query: 245 tgtggatgttgatagtgtgtgcaaagcatgtcttccatagcttcccctcgctgcatgttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgtggatgttgatagtgtgtgcaaagcatgtcttccatagcttcccctcgctgcatgttt 247
Query: 305 atggcctgaaggatgctctaataaagaggatgtctctaccaa 346
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggcctgaaggatgctctaataaagaggatgtctctaccaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 745
Length adjustment: 9
Effective length of query: 337
Effective length of database: 736
Effective search space: 248032
Effective search space used: 248032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_d13.g1 MSMg01no352_d13.g1 CHROMAT_FILE:
MSMg01no352_d13.g1 PHD_FILE: MSMg01no352_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:41 2005
(401 letters)
>mm_chr16_93844126_93844926
Length = 801
Score = 768 bits (397), Expect = 0.0
Identities = 400/401 (99%)
Strand = Plus / Plus
Query: 1 ctaaccattagagcttttaaagtggtaatgctgttctgttgcttgttacgcactgttcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctaaccattagagcttttaaagtggtaatgctgttctgttgcttgttacgcattgttcta 260
Query: 61 attacagtggctttaaatgcaggctcagaatttctcaaaaccctgttttccagataatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attacagtggctttaaatgcaggctcagaatttctcaaaaccctgttttccagataatgc 320
Query: 121 ttatgatcctgatgtgaatgctaaacagatctggatcgataaaacagtgattagtgacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatgatcctgatgtgaatgctaaacagatctggatcgataaaacagtgattagtgacca 380
Query: 181 tatatgcttgacattcactgataatggcaacgggatgacagcagataagttacataaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatatgcttgacattcactgataatggcaacgggatgacagcagataagttacataaaat 440
Query: 241 gctaaggtaaaaacgtgttacagtttggggaatgatgacttctgtcttgaaaattatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctaaggtaaaaacgtgttacagtttggggaatgatgacttctgtcttgaaaattatcct 500
Query: 301 gtgtcatgcaaaaaaccatttcatagccttaagctttgtctttaaaacctgaaatgctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtcatgcaaaaaaccatttcatagccttaagctttgtctttaaaacctgaaatgctat 560
Query: 361 gcctacagtgtggttaggtcttctgttattttctacagcca 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctacagtgtggttaggtcttctgttattttctacagcca 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
