Query= MSMg01no353_a18.b1 MSMg01no353_a18.b1 CHROMAT_FILE:
MSMg01no353_a18.b1 PHD_FILE: MSMg01no353_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:48 2005
(426 letters)
>mm_chr16_88095767_88096590
Length = 824
Score = 642 bits (332), Expect = 0.0
Identities = 385/421 (91%), Gaps = 30/421 (7%)
Strand = Plus / Minus
Query: 6 aattcaccctgatgatttacttcatattccttttgccaagagagacacctgaaagtttaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aattcaccctgatgatttacttcatattccttttgccaagagagacacctgaaagtttaa 418
Query: 66 aaatatgaagtacagtggctcatttgttctctgccctggaagaacagtcctggtatgctg 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 417 aaatatgaagtacagtggctcatttgttctctgccctggaagaacagtcctggtatgccg 358
Query: 126 tgcttacttctgcatgtttacatgttacagacgatccgttatgacatgtcaaaggtacaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgcttacttctgcatgtttacatgttacagacgatccgttatgacatgtcaaaggtacaa 298
Query: 186 ttttatcagccaaagctttggttgactagacgctctcaaatgaggtgaatatatatatat 245
||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 297 ttttatcagccgatgctttggttgactagacgctctcaaatgaggtga--atatatatat 240
Query: 246 agttccaggtgtcagaaaaatgttatttactgacttttatttacttattattatttattt 305
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agttccaggtgtcaggaaaatgttatttactgacttttatttacttattattatttattt 180
Query: 306 attttgttttgtgtctgcacgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 365
||||||||||||||||| ||| | ||||||||||
Sbjct: 179 attttgttttgtgtctg--cga--------------------------gagtgtgtgtgt 148
Query: 366 gtgtgttacatgtgcatgtgatctgtgtatatatgaaaggngattcacacagtatgcatg 425
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 147 gtgtgttacatgtgcatgtgatctgtgtatatatgaaaggggattcacacagtatgcatg 88
Query: 426 t 426
|
Sbjct: 87 t 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 824
Length adjustment: 9
Effective length of query: 417
Effective length of database: 815
Effective search space: 339855
Effective search space used: 339855
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_a18.g1 MSMg01no353_a18.g1 CHROMAT_FILE:
MSMg01no353_a18.g1 PHD_FILE: MSMg01no353_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:48 2005
(448 letters)
>mm_chr16_87929048_87929895
Length = 848
Score = 843 bits (436), Expect = 0.0
Identities = 445/448 (99%)
Strand = Plus / Plus
Query: 1 tgctcatcagccatatgggaaatgtctttaaatgcagtgaatgtgttcaggcaatgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctcatcagccatatgggaaatgtctttaaatgcagtgaatgtgttcaggcaatgcttc 260
Query: 61 cagacctgggactttctgcctggcaagactactggatgtttttcagaccttgggtcccgg 120
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 261 cagacctgggactttctgcctggcaagactactggatgattttcagatcttgggtcccgg 320
Query: 121 tactggcttgggatttaacaggaggcacacgatctagagattactgagcaaagtggctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactggcttgggatttaacaggaggcacacgatctagagattactgagcaaagtggctga 380
Query: 181 aaaaaggccagaatggtaaaaatctaagtctacggagagtgaaactgtgagaaattgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaggccagaatggtaaaaatctaagtctacggagagtgaaactgtgagaaattgatg 440
Query: 241 ataatggtgatagcttttaaattgcttaccatttgataaggaaattgggtaagggtattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatggtgatagcttttaaattgcttaccatttgataaggaaattgggtaagggtattc 500
Query: 301 cctccattaagtcctgtaaccctgaaaattatctcctggcttagatgttagcttcaattt 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 cctccattaagtcctgtaaccctgaaaattatctcatggcttagatgttagcttcaattt 560
Query: 361 acaggcacagaagttaggtatggagaattggagcaacctgtcaaggtccacataattaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaggcacagaagttaggtatggagaattggagcaacctgtcaaggtccacataattaat 620
Query: 421 tagtgagcgtcaagatttgaatccaggc 448
||||||||||||||||||||||||||||
Sbjct: 621 tagtgagcgtcaagatttgaatccaggc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
