Query= MSMg01no353_n24.b1 MSMg01no353_n24.b1 CHROMAT_FILE:
MSMg01no353_n24.b1 PHD_FILE: MSMg01no353_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:52 2005
(396 letters)
>mm_chr16_92874439_92875234
Length = 796
Score = 704 bits (364), Expect = 0.0
Identities = 385/392 (98%)
Strand = Plus / Plus
Query: 5 gaattcagaagctcggacaaaataacttatttatgatgttatttgagaactcattaaaga 64
||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 205 gaattcagaagctaggacaaaataacttatttctgatgatatttgagaacacattaaaga 264
Query: 65 tttttaaatcacattagaaaatatatactgcaacactttgacttctgactattgataaca 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttttaaaccacattagaaaatatatactgcaacactttgacttctgactattgataaca 324
Query: 125 attaggtctattgaggtaagtgtttgatacttttaggtagagtatagtaagggtctgatg 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgggtctattgaggtaagtgtttgatacttttaggtagagtatagtaagggtctgatg 384
Query: 185 agcagagagaagagctcaaacttcctgtgccagggaacagtgttttcctattgttaatgt 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 385 agcagagagaagagctcaaacttcctgtgccagggagcagtgttttcctattgttaatgt 444
Query: 245 ttgtatggattaggtgagtgactacttgttaccttaactgtatgagttagggtcttaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgtatggattaggtgagtgactacttgttaccttaactgtatgagttagggtcttaact 504
Query: 305 ccttttctgttgccttgataaaattctttgacaaaagcaatttgaaaaaggaagggttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccttttctgttgccttgataaaattctttgacaaaagcaatttgaaaaaggaagggttca 564
Query: 365 ttgtagctcacagttaagggcatacctcatca 396
||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtagctcacagttaagggcatacctcatca 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_n24.g1 MSMg01no353_n24.g1 CHROMAT_FILE:
MSMg01no353_n24.g1 PHD_FILE: MSMg01no353_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:52 2005
(416 letters)
>mm_chr16_93026247_93027063
Length = 817
Score = 716 bits (370), Expect = 0.0
Identities = 401/417 (96%), Gaps = 10/417 (2%)
Strand = Plus / Minus
Query: 1 catgttcgagtttgagttaaaatgatgaagaaaatagtcattcttgttcccaaagtcgtg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 661 catgttcgagtttgagttaaaatgatgaagaaaatagtcattct---------agtcgtg 611
Query: 61 gagtatgggaattccatctcccactgtggagactgctatcgtgagtcccttttta-cccc 119
||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 610 gagcatgggaattcaatctcccactgtggagactgctatcgtgagtccctttttatgccc 551
Query: 120 cgtgttcagcagcagcacactggattactctgggataaacaccagctctttgcaggggag 179
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 550 cgtgttcagcagcagcacactggattactcggggataaacagcagctctttgcaggggag 491
Query: 180 actgacggtttttttctaggctggcttctgggaagtgagaatgaaagcttccgtcttggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 actgacggtttttttctaggctggcttctgggaagtgagaatgaaagcttccgtcttggg 431
Query: 240 tgtcttccctcaaatctttctgatggtttcaagaagcactgggctcctgcctgagtctcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgtcttccctcaaatctttctgatggtttcaagaagcactgggctcctgcctgagtctcc 371
Query: 300 accctgagtcatttttcctttcttctttgttccatacagaagagagcagagtgcttccct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 accctgagtcatttttcctttcttctttgttccatacagaagagagcagagtgcttccct 311
Query: 360 cctgtctgcagagaataaggcgtcctttgtaacatatgctctgcggnaactctcagc 416
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 310 cctgtctgcagagaataaggcgtcctttgtaacatatgctctgcggtaactctcagc 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 817
Length adjustment: 9
Effective length of query: 407
Effective length of database: 808
Effective search space: 328856
Effective search space used: 328856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
