NNNTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTTTTATCTTGCCACTCGATAACTCCACTATGTCTGT
TACAGATACTTCATATTCACCATGTTTCAAGGAAAAGTGATTTTCTTGTG
CTAACCAGCAGTCTTACTATTTATTTCAAAGATCAGATGATTTTCTCAGA
ACTATAACATTCAAATCTGTGTGCTTCTTTATCGTCTACTGGAATCCGAA
GGCTGTTAATTTTAAATGTCCATTCATTATTGTTGGGTGGAAGATTTCTG
TGGATCTTTCATGTTTGCTTTGTGGCTGTTCACAGTTTTGTACAGACTAT
CTTTACGTGGAAGTATATGCAACAAATAGCTCCAGGAGGCCCAGACCTTC
ATGTATTGTTTCATTTAATGATCCCTGTGCAGTGAGCTAGATGCTGTAAT
TTTCCATCTCATCATCATTCTCTTTGACAATAGAAGCTCTTAACAAAACT
GGTGGCACATGTCTACTCATGCCTTTTGAGAAATGGAACTTGTACTTTCT
TCAAAGAAAGACAGGAGGACAGGACTTCATTGCCTCTGTTGAGCTAAAAA
AAAAAGTCTTATAGAAGAACATTATTTGGTTCATATCTAATTGGAGACAA
ATCAACCATAAATGAAAGCTGGACTAACGTTCTAGTAGAACATCAAACAC
TTGTCCTGTAGTCTATAGTCCGAAGGTTCTGTGTATTGAN

NCCCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGAATGTTAGCCAGAA
GTCTTAATTCCCTGCAGCCTGTTGGATTGGGAGATAGCTTCTTTATGCTG
TAAGAACATCCCCACCAGTAGGCAGACAATGTGGCAGCTTGCTTCCCCAA
GGCATAATAAGTAAGGAGAGGGAAACTTGGAGAAACCATGCAGAAGGAAG
GTACAGGTTTTAAAAGCACATTGGTGAAAGTGCCTTCTATTGCTTTTGCA
GGGTTCTGTTCATTTAAGTGAGTGAGATATTCTAGCTCACGCAAGGAAAA
GGCTTAGGCAAAATTGTAGAGAGCTAGACATGGGACTATTGGGGGCTGTG
ACAGAGGGTGACTAATCCAGAAATCAAGACTAATTCTAATTATCTTTTGA
AATATTTTATCTATAGTTACTACTGTGTACGAGTGTTTTGCACGCCTATA
TTTCTATGTACAATGTCTGTGCAGTGCCCACAGACACATTGGAGCCCCTG
GAACTGCAGTTGTAGCCAGTTAGCTGCCATGTGGGTATTGAGAATTCGAC
TCAGGTCCTCTGGAAGAACAGCCAGTGCTCTTGATGCTAAGAAATTTCTC
CAGCAGAAGTTTGTAATTATCTTATTGTGGATTGGAGGGGGTGTTTCAGT
GGTTCACCTTCCTTTTTAAGGTAGAGCCTACACTTTGATTATATGGT

Query= MSMg01no354_h01.b1 MSMg01no354_h01.b1 CHROMAT_FILE:
MSMg01no354_h01.b1 PHD_FILE: MSMg01no354_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:35 2005
         (555 letters)



>mm_chr16_77930253_77931204
          Length = 952

 Score =  988 bits (511), Expect = 0.0
 Identities = 543/555 (97%), Gaps = 3/555 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cactcgataactccactatgtctgttacagatacttcatattcaccatgtttcaaggaaa 60
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 752 cactcgataactccactatgtctcttacagatacttcatattcaccatgtttcaaggaaa 693

                                                                       
Query: 61  agtgattttcttgtgctaaccagcagtcttactatttatttcaaagatcagatgattttc 120
           ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 692 agtgattttattgcgctaaccagcagtcttactatttatttcaaagatcagatgatttcc 633

                                                                       
Query: 121 tcagaactataacattcaaatctgtgtgcttctttatcgtctactggaatccgaaggctg 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 632 tcagaactataacattcaaatctgtgcgcttctttatcgtctactggaatccgaaggctg 573

                                                                       
Query: 181 ttaattttaaatgtccattcattattgttgggtggaagatttctgtggatctttcatgtt 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 572 ttaattttaaatgtccattcattatcgttgggtggaagatttctgtggatctttcatgtt 513

                                                                       
Query: 241 tgctttgtggctgttcacagttttgtacagactatctttacgtggaagtatatgcaacaa 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgctttgtgggtgttcacagttttgtacagactatctttacgtggaagtatatgcaacaa 453

                                                                       
Query: 301 atagctccaggaggcccagaccttcatgtattgtttcatttaatgatccctgtgcagtga 360
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 452 atagctccaggaggcccagaccttcgtgtattgtttcatttaatgatccctgtgcagtga 393

                                                                       
Query: 361 gctagatgctgtaattttccatctcatcatcattctctttgacaatagaagctcttaaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gctagatgctgtaattttccatctcatcatcattctctttgacaatagaagctcttaaca 333

                                                                       
Query: 421 aaactggtggcacatgtctactcatgccttttgagaaatggaacttgtactttcttcaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaactggtggcacatgtctactcatgccttttgagaaatggaacttgtactttcttcaaa 273

                                                                       
Query: 481 gaaagacaggaggacaggacttcattgcctctgttgagctaaaaaaaaaagtcttataga 540
           ||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||
Sbjct: 272 gaaagacaggaggacaggacttcattgcctctgttgagct---aaaaaaagtcttagaga 216

                          
Query: 541 agaacattatttggt 555
           |||||||||||||||
Sbjct: 215 agaacattatttggt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 952
Length adjustment: 10
Effective length of query: 545
Effective length of database: 942
Effective search space:   513390
Effective search space used:   513390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)