Query= MSMg01no354_i03.b1 MSMg01no354_i03.b1 CHROMAT_FILE:
MSMg01no354_i03.b1 PHD_FILE: MSMg01no354_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:40 2005
(330 letters)
>mm_chr16_32707762_32708492
Length = 731
Score = 582 bits (301), Expect = e-171
Identities = 319/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgtgtt-tactgtgggttaacaagctggcctagagtggacctcacaagcagaa 62
||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 204 ggaattctgtgttatactgtgggttaacacgctggcccagagtggacctcacaagcagaa 263
Query: 63 attattggcccagagagacaagacctgctcctgggcagggtgcagaccccacctggaagt 122
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attattggcccagagagataagacctgctcctgggcagggtgcagaccccacctggaagt 323
Query: 123 ccttatctcccacagagcccttttggactctatagagtttatgcagcatgaaatcttcat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccttatctcccacagagcccttttggactctatagagtttatgcagcatgaaatcttcat 383
Query: 183 taatattcacttaaacattgctctgggttaaagaggtcatcatagggcagccatgttagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taatattcacttaaacattgctctgggttaaagaggtcatcatagggcagccatgttagc 443
Query: 243 aacggggaaaagccagaggcacaggaggaaggatagaccagagagcggcatggcccagaa 302
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 aacggcgaaaagccagaggcacaggaggaaggagagaccagagagcggcatggcccagaa 503
Query: 303 gggggtgggggtgggggtggaggtg 327
|||||||||||||||||||||||||
Sbjct: 504 gggggtgggggtgggggtggaggtg 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 731
Length adjustment: 9
Effective length of query: 321
Effective length of database: 722
Effective search space: 231762
Effective search space used: 231762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_i03.g1 MSMg01no354_i03.g1 CHROMAT_FILE:
MSMg01no354_i03.g1 PHD_FILE: MSMg01no354_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:40 2005
(243 letters)
>mm_chr16_32824113_32824755
Length = 643
Score = 373 bits (193), Expect = e-108
Identities = 208/213 (97%)
Strand = Plus / Minus
Query: 1 tgtcagaatgaggaggatgtcatctttccttttgagctgcataagtgccggacttgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgtcagaatgaggaggatgtcatctttccttttgagctgcataagtgccggacttgtgaa 354
Query: 61 ggtgagggccattgctagatgggaagccgctgtactccccgtgagtcctctgttagcggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 353 ggtgagggccattgctagatgggaagccgctgtactccccgtgagtcctctgttagcagg 294
Query: 121 agtgtggtgtgagtgactccatgctccagcccggagcacaagctgtggggaggagcggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 agtgtggtgtgagtgactccatgctccagcccggagcacaagctgtggggaggagcggct 234
Query: 181 gtggtggggaggagcggctgtggtggggaggag 213
|||||||| ||||| ||||||||| |||||||
Sbjct: 233 gtggtgggttggagcagctgtggtgaggaggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
