TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTAATATGTCACTATAGGAAAAAATCTGAAATAATAATTACTAACTTA
TGAACTATTTATATATACAAGTTATTGGTCAGACATGCTAATTACAAATG
TAACTTATTTACAGAGATAATCTTGGGAAAAGTGACCAGTTATTCTCGCC
CATCAAATAGCATTCTGTATATGTTGTTAAAATGTAAGGCTAATAAGTAA
TTCAAGAGAAGTTTAAATTAAAGTTTGTGTAATGTAAAATAATGAAAATC
AGGTATATTTTAAAAATATTTTAAAATGGTTAAAACTATTGATACTTGAG
TAAAATGGGTTAAATTTACAGCACACTTTCTTTTTTATTTAATTTTATTT
TTAATTTATTTTTATACTCCACATTCCATGCCCCCACATCCACTCTCTGA
CTGCTCCACATCCCACACCTCCTGTCCACCACAGACCATCTCCATGTGGA
TGCCCCATTCCTCACCCCACCTGAGCTCTAAACTCCCTGGGGCCTCCAGT
CTCTTAAGGGTTAGGAACATCATCTCTGAATGAATACAAACCTGAATACA
ACACACGTTCATGGCAAGAATTCCTTAGGCTCCACTAATTCCCTTGGATG
GAGCACAGNTCTCCTGGTTGGAGAACCCTCCTATCAGAGTCAATAGCATG
CTAGNCTCATTATAGGACAAGGATGGGTGAGATTTGTGATCTGTGA

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATAGTTTGCTGATGAATCCAATAACGATA
AATTGACCATGAAAATATGATGTGAGAGAATCCATGGCAGAGAAATGATA
TTTTGTGTTACTGTAAGTAGAGAAATGTGTTTTTATATAATACATAATAG
TCTTTACTTTGTTATTCCTGAGTTAATGAGTACCAGGAAGAAGAGAAAGC
CAATGTAGCTGACAGTATGGTAGAGCCTTGCCTGATGAATGATACTGATT
GAAATCCATTTATATCTATATAGTGCCATGTCTTTAAGTACCCATTTAGT
AACTATTATCAATGCATGAAATCCCACAAAACAACCTAAGAAACAAACTG
TTATTAACCTTAGTGCAGACTGTATAACCTAGTTAATGTTCTCAGTCAGA
GTAACTGTCATGAGTTCCGTGTTTATCGTATCCACCCATGTCATACTATT
TCATTCCCCGTGTTTCTGTAACTTCTATGTATGTATAAGGATTGCTGTTT
AAACTAAATAGGTTAACATGANGGTGTTTGCTATTCCCCCAAAAGACACC
AGCTGTGCTCTGCCCCAAAAAATGTTTATTTTAATGGCAAAATCTTTAGG
TCTGGTCTCCCTCCCCCCATTTGAGCCCAAGGGCCCCTTTTCTTCCTTGT
GGGTATGAAAAAAATATTTTGTTATTATCAGTATCCCCTTTTTTTTCTTA
ACACCTGTTTTTTTTTTTTT

Query= MSMg01no356_e19.g1 MSMg01no356_e19.g1 CHROMAT_FILE:
MSMg01no356_e19.g1 PHD_FILE: MSMg01no356_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:59 2005
         (441 letters)



>mm_chr16_28063101_28063941
          Length = 841

 Score =  810 bits (419), Expect = 0.0
 Identities = 438/449 (97%), Gaps = 8/449 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagtttgctgatgaa--------tccaataacgataaattgaccatgaaaatatgatgt 52
           ||||||||||||||||        ||||||||||||||||||||||||||||||||||||
Sbjct: 193 atagtttgctgatgaaaatggcgttccaataacgataaattgaccatgaaaatatgatgt 252

                                                                       
Query: 53  gagagaatccatggcagagaaatgatattttgtgttactgtaagtagagaaatgtgtttt 112
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 253 gagagaatccatggcagagaaatgatattttgtgttactgtaagtagataaatgtgtttt 312

                                                                       
Query: 113 tatataatacataatagtctttactttgttattcctgagttaatgagtaccaggaagaag 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tatataatacataatagtctttactttgttattcctgagttaatgagtaccaggaagaag 372

                                                                       
Query: 173 agaaagccaatgtagctgacagtatggtagagccttgcctgatgaatgatactgattgaa 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agaaagccaatgtagctgacagtatggtagagccttgcctgatgaatgatactgattgaa 432

                                                                       
Query: 233 atccatttatatctatatagtgccatgtctttaagtacccatttagtaactattatcaat 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atccatttatatctatatagtgccatgtctttaagtacccatttagtaactattatcaat 492

                                                                       
Query: 293 gcatgaaatcccacaaaacaacctaagaaacaaactgttattaaccttagtgcagactgt 352
           ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gcacgaaatcgcacaaaacaacctaagaaacaaactgttattaaccttagtgcagactgt 552

                                                                       
Query: 353 ataacctagttaatgttctcagtcagagtaactgtcatgagttccgtgtttatcgtatcc 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ataacctagttaatgttctcagtcagagtaactgtcatgagttccgtgtttatcgtatcc 612

                                        
Query: 413 acccatgtcatactatttcattccccgtg 441
           |||||||||||||||||||||||||||||
Sbjct: 613 acccatgtcatactatttcattccccgtg 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)