Query= MSMg01no357_e22.b1 MSMg01no357_e22.b1 CHROMAT_FILE:
MSMg01no357_e22.b1 PHD_FILE: MSMg01no357_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:16 2005
(501 letters)
>mm_chr16_50635035_50635935
Length = 901
Score = 917 bits (474), Expect = 0.0
Identities = 491/497 (98%)
Strand = Plus / Plus
Query: 5 gaattcttggtctggatagagccagggataatgattgagtcatgctgatgtatcagctgt 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggtctggatatagccagggataatgattgagtcatgctgatgtatcagctgt 264
Query: 65 cttcggagcatcaccaggtcctgtgtgtctgcctcttgtactctagtgcctctctcagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 cttcggagcatcaccaggtcctgtgtgtctgcctcttgtactctagtgcctctgtcagaa 324
Query: 125 gtaagtggccaggggcatcagtcctgcagcacactggggccaatttctctcttccttgct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaagtggccaggggcatcagtcctgcagcacactggggccaatttctctcttccttgct 384
Query: 185 ggagcaagggtcagggtgctgaggcatgtgccgaccaactctcacatacctgcctgttcc 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggagcaagggtcagggagctgaggcatgtgccgaccaactctcacatacctgcctgttcc 444
Query: 245 ccatgtggttcagggagtccctgaccagccagagaaagcctagagaaagagagcttcagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccatgtggttcagggagtccctgaccagccagagaaagcctagagaaagagagcttcagc 504
Query: 305 atgcagaaaactctcctaattctttcctctcactggaagtagttttgtgtgccaattttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgcagaaaactctcctaattctttcctctcactggaagtagttttgtgtgccaattttt 564
Query: 365 actggttcaatgaacaattccacagttgatctaatagcaggagacaaaacataagaccta 424
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actggttcagtgaacaattccacagttgatctaatagcaggagacaaaacataagaccta 624
Query: 425 tgcttcaaccacttcatttattgaatatttacactgtgcctgaggaacgtgtantgctgg 484
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 625 tgcttcaaccacttcatttattgaatatttacactgtgcctgaggaacgggtagtgctgg 684
Query: 485 ctagcaagtcccaaatg 501
|||||||||||||||||
Sbjct: 685 ctagcaagtcccaaatg 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_e22.g1 MSMg01no357_e22.g1 CHROMAT_FILE:
MSMg01no357_e22.g1 PHD_FILE: MSMg01no357_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:16 2005
(405 letters)
>mm_chr16_50792904_50793708
Length = 805
Score = 569 bits (294), Expect = e-166
Identities = 305/310 (98%), Gaps = 3/310 (0%)
Strand = Plus / Minus
Query: 1 ttccccagaaaccatcaaataatgccaaagaaaacacgctccaaaacactgagtgttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttccccagaaaccatcaaataatgccaaagaaaacacgctccaaaacactgagtgttcct 248
Query: 61 ggagaaaactgtatcccttctgcttatccttcaggaagtctcttttgcaaaacccgaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggagaaaactgtatcccttctgcttatccttcaggaagtctcttttgcaaaacccgaagg 188
Query: 121 ctgggtaaaattataaggaacagagttttagtttctcacagctctggaaacctgggatca 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctgggtaaaattgtaaggaacagagttttagtttctcacagctctggaaacctgggatca 128
Query: 181 ctgggagtggcaggtttggctatgtgatgagagcaggtttctgcttttaagagagtgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ctgggagtggcaggtttggctatgtgatgagagcaggtttctgcttttaagagagtgtgt 68
Query: 241 ggttgcagcttcttccaaaggggtacaggcctatgctctcacatgctggactgtgaagga 300
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 g---gcagcttcttccgaaggggtacaggcctatgctctcacatgctggactgtgaagga 11
Query: 301 tctagagaac 310
||||||||||
Sbjct: 10 tctagagaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
