Query= MSMg01no358_e13.b1 MSMg01no358_e13.b1 CHROMAT_FILE:
MSMg01no358_e13.b1 PHD_FILE: MSMg01no358_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:30 2005
(526 letters)
>mm_chr16_87772597_87773521
Length = 925
Score = 992 bits (513), Expect = 0.0
Identities = 516/517 (99%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 10 ctttcaggtctgatccagcttgggtactacaggttctgtgtcagaagtacatggcttctt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctttcaggtctgatccagcttgggtactacaggttctgtgtcagaagtacatggcttctt 269
Query: 70 cagcaatagggactcacctccaacctctaggggcatccaagggcaacagtagtactctat 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cagcaatagggactcacctccaacctctaggggcatccaagggcaacagtagtactctat 329
Query: 130 agtgctgagggcttttgttgttgtttctagctgatctatgcctcttgcagggagcatttc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agtgctgagggcttttgttgttgtttctagctgatctatgcctcttgcagggagcatttc 389
Query: 190 cagcctagataagaaagtttcatttaaattatatatgtatatgtaaacacagacatatat 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cagcctagataagaaagtttcatttaaattatatatgtatatgtaaacacagacatatat 449
Query: 250 gctatatgtaattttaagtagctggataacactgtgattccttatgacattgccaggcgt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gctatatgtaattttaagtagctggataacactgtgattccttatgacattgccaggcgt 509
Query: 310 ccttaccttctgtattcatctccctcttactaactcaagtctcccaccattttttttttc 369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 510 ccttaccttctgtattcatctccctcttactaactcaagtctcccaccattttttttt-c 568
Query: 370 tggtttcctccttcaaatcatgtgtactctgttagcccctcacccctatctcatggtctt 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tggtttcctccttcaaatcatgtgtactctgttagcccctcacccctatctcatggtctt 628
Query: 430 ttttaaatttaatttgttaatttttttacttccctcatttctgcagttattccaggccat 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttttaaatttaatttgttaatttttttacttccctcatttctgcagttattccaggccat 688
Query: 490 gtgcttggagatttaaagttaggagtcatggatgaga 526
|||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtgcttggagatttaaagttaggagtcatggatgaga 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_e13.g1 MSMg01no358_e13.g1 CHROMAT_FILE:
MSMg01no358_e13.g1 PHD_FILE: MSMg01no358_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:30 2005
(542 letters)
>mm_chr16_87926103_87927044
Length = 942
Score = 1040 bits (538), Expect = 0.0
Identities = 541/542 (99%)
Strand = Plus / Minus
Query: 1 atctgagcctgtgtcctctaaggatccaagtgttctaattggcttttgacattttcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 atctgagcctgtgtcctctaaggatccaagtgttctaattggcttttgacattttcagtg 683
Query: 61 aaatgagaggcaatcacgcccccatggtttaatatcctgcattatctagagtgatttcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaatgagaggcaatcacgcccccatggtttaatatcctgcattatctagagtgatttcgg 623
Query: 121 aggcttactcgggatagagacaatctggaaagggaaagctgtcatttaaacactcggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aggcttactcgggatagagacaatctggaaagggaaagctgtcatttaaacactcggttt 563
Query: 181 ggtcttttagcatttaccataattttggcaaagcatactcataatttgaagaagtgctaa 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gatcttttagcatttaccataattttggcaaagcatactcataatttgaagaagtgctaa 503
Query: 241 gattctcaccttttaaactaataaaattatctattagaaaggatacaacacatttactct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gattctcaccttttaaactaataaaattatctattagaaaggatacaacacatttactct 443
Query: 301 gaaaatgctattttagggcctgacaaagaaataaacttcattgagcacagtattacagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaaaatgctattttagggcctgacaaagaaataaacttcattgagcacagtattacagta 383
Query: 361 aatagaactgggagataagcaagaaagatatctttggcttagtggctcctctagctacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aatagaactgggagataagcaagaaagatatctttggcttagtggctcctctagctacca 323
Query: 421 actgtgacctatgtaggtcacttatcccaagacctgttctataaagggcctgatatagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actgtgacctatgtaggtcacttatcccaagacctgttctataaagggcctgatatagaa 263
Query: 481 aacagagcaatggacttggagaatcctcaagtgaaatttcccagcaaaaatgtctctggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacagagcaatggacttggagaatcctcaagtgaaatttcccagcaaaaatgtctctggg 203
Query: 541 tg 542
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
