Query= MSMg01no358_f23.b1 MSMg01no358_f23.b1 CHROMAT_FILE:
MSMg01no358_f23.b1 PHD_FILE: MSMg01no358_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:37 2005
(443 letters)
>mm_chr16_71812952_71813797
Length = 846
Score = 808 bits (418), Expect = 0.0
Identities = 435/442 (98%), Gaps = 3/442 (0%)
Strand = Plus / Minus
Query: 5 gaattccttcttctc---cttctttttttaatcaggatatcacactgtggctaggtcatt 61
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaattccttcttctccttcttctttttttaatcaggatatcacactgtggctaggtcatt 587
Query: 62 atttaggatcataagtataaaaattgctagcatgtttgtcttggacctctgtattttgtt 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 586 atttaggatcataagtataaaaattgctagcatgtttgtcttggacctctgtatttagct 527
Query: 122 ttacccattaaggacggttggatggtgataatgtatggcttcctggagtgacttctctag 181
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 526 ttacccattaaggacggttggatggtgataatgtatgacttcctggagtgacttctctag 467
Query: 182 ccctttactctttgactttctctcttataacatttcgcatgtggtgctcctgtgattaat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ccctttactctttgactttctctcttataacatttcgcatgtggtgctcctgtgattaat 407
Query: 242 atttcatgctggtgttcttatggacagcatgatacagtgaggtccattcaacactccaat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atttcatgctggtgttcttatggacagcatgatacagtgaggtccattcaacactccaat 347
Query: 302 agctctgctgccacagaaacgtaactaatagctaaagctaagcatcatgcggctctggga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agctctgctgccacagaaacgtaactaatagctaaagctaagcatcatgcggctctggga 287
Query: 362 ggtctcctatgcggaagaaacagacaatatcttgtcacatcataaatttataagcagtta 421
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 286 ggtctcctatgcggaagaaacagacaatatcttgtcacatcataaatttataaggagtta 227
Query: 422 attaaaggcctcctttttgcat 443
||||||||||||||||||||||
Sbjct: 226 attaaaggcctcctttttgcat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 846
Length adjustment: 10
Effective length of query: 433
Effective length of database: 836
Effective search space: 361988
Effective search space used: 361988
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_f23.g1 MSMg01no358_f23.g1 CHROMAT_FILE:
MSMg01no358_f23.g1 PHD_FILE: MSMg01no358_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:37 2005
(435 letters)
>mm_chr16_71664224_71665058
Length = 835
Score = 706 bits (365), Expect = 0.0
Identities = 419/437 (95%), Gaps = 5/437 (1%)
Strand = Plus / Plus
Query: 1 tcttctcaaaaaaa-tgtataagtaattgatgttgcagaaaataagacatgtttttcata 59
|||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tcttctcaaaaaaaatgtgtaagtaattgatgttgcagaaaataaaacatgtttttcata 260
Query: 60 ggaagaggaaaaaatttcctgtgttctggaatatacaaaattaaaccaaataattaatat 119
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaagaggaaaaa-tttcctgtgttctggaatatacaaaattaaaccaaataattaatat 319
Query: 120 actattaaagaagataccaatacatttagcatgtgtggtgacatggaagacagtatgaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 actattaaagaagataccaatacatttagcatgtgtggtgacatggaagacagtatgaat 379
Query: 180 gagtgatgtaggtacaggcaacattctaagacatcagttaaggaggttaagatgtgtttc 239
||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 380 gagtgatgtagatacaggcaaaattctaagacatcagttaaagaggttaagatgtgtttt 439
Query: 240 attgctaaaggcacagttaggccctgagaatggcaaaaaaaaaatatgataattattata 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 440 attgctaaaggcacagttaggccctgagaatggcaaaaaaaaa-tatgataattacgata 498
Query: 300 atgaagattccaggactgaagaaggtccctgctggccactgagcaaagccaccatgaaac 359
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 499 ttgaagattccaggactgaagaaggtccctgctggccactgagcaaagccagcatgaaac 558
Query: 360 aggttctttctgttttgttttgttgttgttgttgtttttttt-aatcaaaattatctttg 418
||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||||
Sbjct: 559 aggttctttctgttttgttttgttgtt-ttgttatttttttttaatcaaaatgatctttg 617
Query: 419 tcatttaaacccttaag 435
||||||||||| |||||
Sbjct: 618 tcatttaaaccattaag 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
